Genome sequence data of Burkholderia sp. IMCC1007 isolated from maize rhizosphere: A potential strain in fusaric acid mycotoxin biodegradation

被引:2
作者
Din, Abd Rahman Jabir Mohd [1 ]
Othman, Nor Zalina [1 ,2 ]
机构
[1] Univ Teknol Malaysia, Innovat Ctr Agritechnol Adv Bioproc ICA, Pagoh Educ Hub, Muar 84600, Johor, Malaysia
[2] Univ Teknol Malaysia, Fac Chem & Energy Engn, Johor Baharu 81310, Malaysia
关键词
Burkholderia Genome sequence; Mycotoxin degradation; Fusaric acid; DERIVATIVES; DEGRADATION; QUINOLINE; PYRIDINE;
D O I
10.1016/j.dib.2023.109204
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Burkholderia sp. IMCC1007 is a gram-negative, aerobic bacterium affiliated with class Betaproteobacteria, which was successfully isolated from maize rhizospheric soil sample in UTM research plot, Pagoh, Malaysia by using enrichment method. Strain IMCC1007 utilized 50 mgL(-1) fusaric acid as its carbon source and degraded it completely within 14 h. Genome sequencing was performed using Illumina NovaSeq platform. The assembled genome was annotated using RAST (Rapid Annotation Subsystem Technology) server. The genome size was approximately 8,568,405 base pairs (bp) in 147 contigs with a G+C content of 66.04%. The genome includes 8,733 coding sequences and 68 RNAs. The genome sequence has been deposited at GenBank with the accession number of JAPVQY0000 00000. In the pairwise genome-togenome comparisons, the strain IMCC1007 had an average nucleotide identity (ANI) of 91.9% and digital DNA-DNA hybridization (dDDH) value of 55.2% with Burkholderia anthina DSM 16086T respectively. Interestingly, fusaric acid resistance gene (fusC) and nicABCDFXT gene clusters (hydroxylation of pyridine compound) were found in the genome. Additionally, preliminary genome annotation analysis of strain IMCC1007 identified tryptophan halogenase (prnA) gene responsible for antifungal pyrrolnitrin biosynthesis. This dataset herein provides further insights into the fusaric acid degradation mechanism of the genus Burkholderia
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页数:8
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