A Mathematical Model of the G1/S Transition for the Budding Yeast

被引:0
作者
Palumbo, Pasquale [1 ]
机构
[1] Univ Milano Bicocca, Dept Biotechnol & Biosci BtBs, Piazza Sci 2, I-20126 Milan, Italy
来源
2023 IEEE 21ST WORLD SYMPOSIUM ON APPLIED MACHINE INTELLIGENCE AND INFORMATICS, SAMI | 2023年
关键词
D O I
10.1109/SAMI58000.2023.10044536
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
A mathematical model of the G1/S transition is proposed, for the budding yeast Saccharomyces cerevisiae. It is known in biology that such a transition is promoted by multi-step phosphorylation processes leading to the activation of the over 200 G1/S regulon genes. Feedback mechanisms play an active role, since part of the enzymes catalyzing the phosphorylation reactions are expressed by the G1/S regulon. The proposed Mathematical model is a Stochastic Hybrid System, since it merges such discrete features (modeled by means of Chemical Master Equations) with a continuous part related to protein and ribosome concentrations. The model manages to reproduce a large variety of available experimental data and suggests new experiments (carried out at the University of Milano Bicocca) that further validate the model by means of independent data. Results have been recently published on Nature Communications.
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页码:11 / 11
页数:1
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