Identification of novel candidate biomarkers for acute myocardial infarction by the Olink proteomics platform

被引:5
作者
Liu, Jun [1 ,2 ,3 ]
Chen, Baofu [1 ,2 ]
Lu, Hongsheng [1 ,2 ]
Chen, Qi [1 ,2 ]
Li, Ji-Cheng [1 ,2 ,3 ]
机构
[1] Taizhou Univ Hosp, Taizhou Cent Hosp, Dept Cardiothorac Surg, Taizhou 318000, Peoples R China
[2] Taizhou Univ Hosp, Taizhou Cent Hosp, Dept Pathol, Taizhou 318000, Peoples R China
[3] Zhejiang Univ, Inst Cell Biol, Hangzhou 310058, Peoples R China
关键词
Olink; Acute myocardial infarction; Biomarkers; LASSO; Inflammatory response; MITOCHONDRIAL CARBONIC-ANHYDRASE; TRANSGLUTAMINASE; PROFILE;
D O I
10.1016/j.cca.2023.117506
中图分类号
R446 [实验室诊断]; R-33 [实验医学、医学实验];
学科分类号
1001 ;
摘要
Background: Both pathological and normal processes depend on proteins. In this study, plasma protein profiles were analyzed by a novel proximity extension assay (PEA) to identify potential pathogenic mechanisms and diagnostic biomarkers in patients diagnosed with acute myocardial infarction (AMI).Methods: In this study, we identified a total of 92 plasma proteins using the Olink Target 96 Cardiovascular III panel in a cohort consisting of 30 healthy controls (HC), 28 patients with unstable angina (UA) and 30 patients with AMI. Subsequently, we conducted a differential expression analysis to identify protein molecules that were specifically expressed in patients with AMI. To gain insights into the potential functional mechanisms of these differentially expressed molecules, we performed Gene Ontology (GO) enrichment and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses. Following that, the utilization of least absolute shrinkage and selection operator (LASSO) regression facilitated the identification of potential protein biomarkers, enabling the differentiation between AMI and UA. A diagnostic model was subsequently developed through logistic regres-sion, and the effectiveness of these markers was assessed using receiver operating characteristic (ROC) analysis. Ultimately, the diagnostic capabilities of these potential biomarkers were validated in an independent validation cohort consisting of 30 UA cases and 30 AMI cases.Results: In this study, a comprehensive analysis of plasma proteins identified a total of 92 proteins. Further analysis using analysis of variance revealed that 25 proteins exhibited specific expression in the AMI group compared to the HC and UA groups. Additionally, KEGG enrichment analysis indicated that these differentially expressed proteins were primarily associated with the activation of cytokine-cytokine receptor interaction, PI3K-Akt signaling pathway, and GnRH signaling pathway. AGRP, TGM2, IL6, GH1, and CA5A were identified through LASSO regression as prospective protein biomarkers for distinguishing between UA and AMI. The diagnostic model comprising these five proteins exhibited exceptional performance in both the discovery and validation datasets, surpassing AUC values of 0.9.Conclusion: The findings of our study provide additional insights into the involvement of the inflammatory response and AKT cascade response in the development of AMI. Moreover, we have identified potential protein markers that could be utilized for the accurate diagnosis of AMI. These results offer a fresh perspective for clinical decision-making in the context of AMI.
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页数:11
相关论文
共 56 条
  • [1] Aldam G, 2021, REV ESP CARDIOL, V74, P820, DOI [10.1016/j.recesp.2021.02.018, 10.1016/j.rec.2021.02.012]
  • [2] Effect of Magnesium Supplementation on Circulating Biomarkers of Cardiovascular Disease
    Alonso, Alvaro
    Chen, Lin Y.
    Rudser, Kyle D.
    Norby, Faye L.
    Rooney, Mary R.
    Lutsey, Pamela L.
    [J]. NUTRIENTS, 2020, 12 (06)
  • [3] IL-6 and its receptors in coronary artery disease and acute myocardial infarction
    Anderson, Daniel R.
    Poterucha, Joseph T.
    Mikuls, Ted R.
    Duryee, Michael J.
    Garvin, Robert P.
    Klassen, Lynell W.
    Shurmur, Scott W.
    Thiele, Geoffrey M.
    [J]. CYTOKINE, 2013, 62 (03) : 395 - 400
  • [4] Homogenous 96-Plex PEA Immunoassay Exhibiting High Sensitivity, Specificity, and Excellent Scalability
    Assarsson, Erika
    Lundberg, Martin
    Holmquist, Goeran
    Bjoerkesten, Johan
    Thorsen, Stine Bucht
    Ekman, Daniel
    Eriksson, Anna
    Dickens, Emma Rennel
    Ohlsson, Sandra
    Edfeldt, Gabriella
    Andersson, Ann-Catrin
    Lindstedt, Patrik
    Stenvang, Jan
    Gullberg, Mats
    Fredriksson, Simon
    [J]. PLOS ONE, 2014, 9 (04):
  • [5] Biomarkers in acute myocardial infarction: current perspectives
    Aydin, Suleyman
    Ugur, Kader
    Aydin, Suna
    Sahin, Ibrahim
    Yardim, Meltem
    [J]. VASCULAR HEALTH AND RISK MANAGEMENT, 2019, 15 : 1 - 10
  • [6] Benjamin EJ, 2019, CIRCULATION, V139, pE56, DOI [10.1161/CIR.0000000000000746, 10.1161/CIR.0000000000000659]
  • [7] IL-10 and integrin signaling pathways are associated with head and neck cancer progression
    Bornstein, Sophia
    Schmidt, Mark
    Choonoo, Gabriele
    Levin, Trevor
    Gray, Joe
    Thomas, Charles R., Jr.
    Wong, Melissa
    McWeeney, Shannon
    [J]. BMC GENOMICS, 2016, 17
  • [8] Technical Performance Evaluation of Olink Proximity Extension Assay for Blood-Based Biomarker Discovery in Longitudinal Studies of Alzheimer's Disease
    Carlyle, Becky C.
    Kitchen, Robert R.
    Mattingly, Zoe
    Celia, Amanda M.
    Trombetta, Bianca A.
    Das, Sudeshna
    Hyman, Bradley T.
    Kivisakk, Pia
    Arnold, Steven E.
    [J]. FRONTIERS IN NEUROLOGY, 2022, 13
  • [9] Expression level and diagnostic value of exosomalNEAT1/miR-204/MMP-9 in acuteST-segment elevation myocardial infarction
    Chen, Zhenzhen
    Yan, Youyou
    Wu, Junduo
    Qi, Chao
    Liu, Jia
    Wang, Junnan
    [J]. IUBMB LIFE, 2020, 72 (11) : 2499 - 2507
  • [10] Cogan Joy Darlene, 2006, Pediatr Endocrinol Rev, V3 Suppl 3, P480