ChimeraNet: U-Net for Hair Detection in Dermoscopic Skin Lesion Images

被引:20
作者
Lama, Norsang [1 ]
Kasmi, Reda [2 ]
Hagerty, Jason R. [3 ]
Stanley, R. Joe [1 ]
Young, Reagan [1 ]
Miinch, Jessica [1 ]
Nepal, Januka [3 ]
Nambisan, Anand [1 ]
Stoecker, William, V [3 ]
机构
[1] Missouri Univ Sci & Technol, Rolla, MO 65409 USA
[2] Univ Bejaia, Bejaia, Algeria
[3] S&A Technol, Rolla, MO 65401 USA
基金
美国国家卫生研究院; 美国国家科学基金会;
关键词
Hair removal; Melanoma; Dermoscopy; Deep learning; Image segmentation; Transfer learning; REMOVAL ALGORITHM; DIAGNOSIS; SEGMENTATION; CANCER; CLASSIFICATION;
D O I
10.1007/s10278-022-00740-6
中图分类号
R8 [特种医学]; R445 [影像诊断学];
学科分类号
1002 ; 100207 ; 1009 ;
摘要
Hair and ruler mark structures in dermoscopic images are an obstacle preventing accurate image segmentation and detection of critical network features. Recognition and removal of hairs from images can be challenging, especially for hairs that are thin, overlapping, faded, or of similar color as skin or overlaid on a textured lesion. This paper proposes a novel deep learning (DL) technique to detect hair and ruler marks in skin lesion images. Our proposed ChimeraNet is an encoder-decoder architecture that employs pretrained EfficientNet in the encoder and squeeze-and-excitation residual (SERes) structures in the decoder. We applied this approach at multiple image sizes and evaluated it using the publicly available HAM10000 (ISIC2018 Task 3) skin lesion dataset. Our test results show that the largest image size (448 x 448) gave the highest accuracy of 98.23 and Jaccard index of 0.65 on the HAM10000 (ISIC 2018 Task 3) skin lesion dataset, exhibiting better performance than for two well-known deep learning approaches, U-Net and ResUNet-a. We found the Dice loss function to give the best results for all measures. Further evaluated on 25 additional test images, the technique yields state-of-the-art accuracy compared to 8 previously reported classical techniques. We conclude that the proposed ChimeraNet architecture may enable improved detection of fine image structures. Further application of DL techniques to detect dermoscopy structures is warranted.
引用
收藏
页码:526 / 535
页数:10
相关论文
共 47 条
[1]   A Feature-Preserving Hair Removal Algorithm for Dermoscopy Images [J].
Abbas, Qaisar ;
Fondon Garcia, Irene ;
Celebi, M. Emre ;
Ahmad, Waqar .
SKIN RESEARCH AND TECHNOLOGY, 2013, 19 (01) :E27-E36
[2]  
Abraham N, 2019, I S BIOMED IMAGING, P683, DOI 10.1109/ISBI.2019.8759329
[3]   Noninvasive Real-Time Automated Skin Lesion Analysis System for Melanoma Early Detection and Prevention [J].
Abuzaghleh, Omar ;
Barkana, Buket D. ;
Faezipour, Miad .
IEEE JOURNAL OF TRANSLATIONAL ENGINEERING IN HEALTH AND MEDICINE, 2015, 3
[4]  
[Anonymous], Batch Normalization: Accelerating Deep Network Training by Reducing Internal Covariate Shift
[5]   Digital hair segmentation using hybrid convolutional and recurrent neural networks architecture [J].
Attia, Mohamed ;
Hossny, Mohammed ;
Zhou, Hailing ;
Nahavandi, Saeid ;
Asadi, Hamed ;
Yazdabadi, Anousha .
COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE, 2019, 177 :17-30
[6]   Eff-UNet: A Novel Architecture for Semantic Segmentation in Unstructured Environment [J].
Baheti, Bhakti ;
Innani, Shubham ;
Gajre, Suhas ;
Talbar, Sanjay .
2020 IEEE/CVF CONFERENCE ON COMPUTER VISION AND PATTERN RECOGNITION WORKSHOPS (CVPRW 2020), 2020, :1473-1481
[7]   Pattern analysis: A two-step procedure for the dermoscopic diagnosis of melanoma [J].
Braun, RP ;
Rabinovitz, HS ;
Oliviero, M ;
Kopf, AW ;
Saurat, JH .
CLINICS IN DERMATOLOGY, 2002, 20 (03) :236-239
[8]  
Codella Noel, 2015, Machine Learning in Medical Imaging. 6th International Workshop, MLMI 2015, held in conjunction with MICCAI 2015. Proceedings: LNCS 9352, P118, DOI 10.1007/978-3-319-24888-2_15
[9]   Deep learning ensembles for melanoma recognition in dermoscopy images [J].
Codella, N. C. F. ;
Nguyen, Q. -B. ;
Pankanti, S. ;
Gutman, D. A. ;
Helba, B. ;
Halpern, A. C. ;
Smith, J. R. .
IBM JOURNAL OF RESEARCH AND DEVELOPMENT, 2017, 61 (4-5)
[10]  
Codella NCE, 2018, IEEE ENG MED BIO, P3414, DOI 10.1109/EMBC.2018.8512980