Raman spectroscopy combined with a support vector machine algorithm as a diagnostic technique for primary Sjogren's syndrome

被引:10
|
作者
Chen, Xiaomei [1 ,2 ]
Wu, Xue [1 ,2 ]
Chen, Chen [3 ]
Luo, Cainan [1 ,2 ]
Shi, Yamei [1 ,2 ]
Li, Zhengfang [1 ,2 ]
Lv, Xiaoyi [4 ]
Chen, Cheng [3 ]
Su, Jinmei [1 ,5 ]
Wu, Lijun [1 ,2 ]
机构
[1] Peoples Hosp Xinjiang Uygur Autonomous Reg, Dept Rheumatol & Immunol, Urumqi, Xinjiang, Peoples R China
[2] Xinjiang Clin Res Ctr Rheumatoid Arthrit, Urumqi, Xinjiang, Peoples R China
[3] Xinjiang Univ, Coll Software, Urumqi, Xinjiang, Peoples R China
[4] Xinjiang Univ, Coll Software, Key Lab Signal Detect & Proc, Urumqi, Xinjiang, Peoples R China
[5] Chinese Acad Med Sci & Peking Union Med Coll, Peking Union Med Coll Hosp, Dept Rheumatol & Clin Immunol, Beijing, Peoples R China
关键词
CLASSIFICATION; SERUM; SVM;
D O I
10.1038/s41598-023-29943-9
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The aim of this study was to explore the feasibility of Raman spectroscopy combined with computer algorithms in the diagnosis of primary Sjogren syndrome (pSS). In this study, Raman spectra of 60 serum samples were acquired from 30 patients with pSS and 30 healthy controls (HCs). The means and standard deviations of the raw spectra of patients with pSS and HCs were calculated. Spectral features were assigned based on the literature. Principal component analysis (PCA) was used to extract the spectral features. Then, a particle swarm optimization (PSO)-support vector machine (SVM) was selected as the method of parameter optimization to rapidly classify patients with pSS and HCs. In this study, the SVM algorithm was used as the classification model, and the radial basis kernel function was selected as the kernel function. In addition, the PSO algorithm was used to establish a model for the parameter optimization method. The training set and test set were randomly divided at a ratio of 7:3. After PCA dimension reduction, the specificity, sensitivity and accuracy of the PSO-SVM model were obtained, and the results were 88.89%, 100% and 94.44%, respectively. This study showed that the combination of Raman spectroscopy and a support vector machine algorithm could be used as an effective pSS diagnosis method with broad application value.
引用
收藏
页数:6
相关论文
共 50 条
  • [1] Rapid Screening of Thyroid Dysfunction Using Raman Spectroscopy Combined with an Improved Support Vector Machine
    Wang, Dingding
    Jiang, Jing
    Mo, Jiaqing
    Tang, Jun
    Lv, Xiaoyi
    APPLIED SPECTROSCOPY, 2020, 74 (06) : 674 - 683
  • [2] Diagnosis of pathological minor salivary glands in primary Sjogren's syndrome by using Raman spectroscopy
    Xue, Lili
    Sun, Pei
    Ou, Dongchen
    Chen, Peiqiong
    Chen, Meiqing
    Yan, Bing
    LASERS IN MEDICAL SCIENCE, 2014, 29 (02) : 723 - 728
  • [3] An intraoperative diagnosis of parotid gland tumors using Raman spectroscopy and support vector machine
    Yan, Bing
    Wen, Zhining
    Li, Yi
    Li, Longjiang
    Xue, Lili
    LASER PHYSICS, 2014, 24 (11)
  • [4] Lipid profiling using Raman and a modified support vector machine algorithm
    Potcoava, Mariana C.
    Futia, Gregory L.
    Gibson, Emily A.
    Schlaepfer, Isabel R.
    JOURNAL OF RAMAN SPECTROSCOPY, 2021, 52 (11) : 1910 - 1922
  • [5] Potential of cancer screening with serum surface-enhanced Raman spectroscopy and a support vector machine
    Li, S. X.
    Zhang, Y. J.
    Zeng, Q. Y.
    Li, L. F.
    Guo, Z. Y.
    Liu, Z. M.
    Xiong, H. L.
    Liu, S. H.
    LASER PHYSICS LETTERS, 2014, 11 (06)
  • [6] Raman spectroscopy with an improved support vector machine for discrimination of thyroid and parathyroid tissues
    Hu, Jie
    Xing, Jinyu
    Shao, Pengfei
    Ma, Xiaopeng
    Li, Peikun
    Liu, Peng
    Zhang, Ru
    Chen, Wei
    Lei, Wang
    Xu, Ronald X.
    JOURNAL OF BIOPHOTONICS, 2024, 17 (08)
  • [7] Periodontitis detection using Raman spectroscopy, support vector machine, and salivary biomarkers
    Villalba-Hernandez, Caroleny
    de los Angeles Moyaho-Bernal, Maria
    Narea-Jimenez, Freddy
    Nahum Chavarria-Lizarraga, Hector
    Cecilia Galeazzi-Minutti, Maria
    Carrasco-Gutierrez, Rosendo
    Castro-Ramos, Jorge
    JOURNAL OF RAMAN SPECTROSCOPY, 2022, 53 (05) : 911 - 923
  • [8] Analysis of dengue infection based on Raman spectroscopy and support vector machine (SVM)
    Khan, Saranjam
    Ullah, Rahat
    Khan, Asifullah
    Wahab, Noorul
    Bilal, Muhammad
    Ahmed, Mushtaq
    BIOMEDICAL OPTICS EXPRESS, 2016, 7 (06): : 2249 - 2256
  • [9] Optical screening of nasopharyngeal cancer using Raman spectroscopy and support vector machine
    Khan, Saranjam
    Ullah, Rahat
    Shahzad, Shaheen
    Javaid, Samina
    Khan, Asifullah
    OPTIK, 2018, 157 : 565 - 570
  • [10] Rapid Nondestructive Detection of Water Content in Fresh Pork Based on Spectroscopy Technique Combined with Support Vector Machine
    Zhang Hai-yun
    Peng Yan-kun
    Wang Wei
    Zhao Song-wei
    Liu Qiao-qiao
    SPECTROSCOPY AND SPECTRAL ANALYSIS, 2012, 32 (10) : 2794 - 2798