Making the most effective use of available computational methods for drug repositioning
被引:1
作者:
Gori, Denis Prada N.
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机构:
Univ La Plata UNLP, Fac Exact Sci, Lab Bioact Cpd Res & Dev LIDeB, La Plata, Argentina
Argentinean Natl Council Sci & Tech Res, CONICET, CCT La Plata, La Plata, ArgentinaUniv La Plata UNLP, Fac Exact Sci, Lab Bioact Cpd Res & Dev LIDeB, La Plata, Argentina
Gori, Denis Prada N.
[1
,2
]
Alberca, Lucas N.
论文数: 0引用数: 0
h-index: 0
机构:
Univ La Plata UNLP, Fac Exact Sci, Lab Bioact Cpd Res & Dev LIDeB, La Plata, Argentina
Argentinean Natl Council Sci & Tech Res, CONICET, CCT La Plata, La Plata, ArgentinaUniv La Plata UNLP, Fac Exact Sci, Lab Bioact Cpd Res & Dev LIDeB, La Plata, Argentina
Alberca, Lucas N.
[1
,2
]
Talevi, Alan
论文数: 0引用数: 0
h-index: 0
机构:
Univ La Plata UNLP, Fac Exact Sci, Lab Bioact Cpd Res & Dev LIDeB, La Plata, Argentina
Argentinean Natl Council Sci & Tech Res, CONICET, CCT La Plata, La Plata, ArgentinaUniv La Plata UNLP, Fac Exact Sci, Lab Bioact Cpd Res & Dev LIDeB, La Plata, Argentina
Talevi, Alan
[1
,2
]
机构:
[1] Univ La Plata UNLP, Fac Exact Sci, Lab Bioact Cpd Res & Dev LIDeB, La Plata, Argentina
[2] Argentinean Natl Council Sci & Tech Res, CONICET, CCT La Plata, La Plata, Argentina
Drug repurposing;
drug repositioning;
computer-aided drug repurposing;
in silico drug repurposing;
portfolio management;
network analysis;
electronic health records;
chemoproteomics;
CONNECTIVITY MAP;
SMALL MOLECULES;
STRATEGIES;
INHIBITORS;
ACCURACY;
CANDO;
D O I:
10.1080/17460441.2023.2198700
中图分类号:
R9 [药学];
学科分类号:
1007 ;
摘要:
IntroductionOver the last decades, there has been substantial debate around the apparent drop in productivity in the pharmaceutical sector. The development of second or further medical uses for known drugs is a possible answer to expedite the development of new therapeutic solutions. Computational methods are among the main strategies for exploring drug repurposing opportunities in a systematic manner.Areas coveredThis article reviews three general approximations to systematically discover new therapeutic uses for existing drugs: disease-, target-, and drug-centric approaches, along with some recently reported computational methods associated with them.Expert opinionComputational methods are essential for organizing and analyzing the large volume of available biomedical data, which has grown exponentially in the era of big data. The clearest trend in the field involves the use of integrative approaches where different types of data are combined into multipartite networks. Every aspect of computer-guided drug repositioning has currently incorporated state-of-the-art machine learning tools to boost their pattern recognition and predictive capabilities. Remarkably, a majority of the recently reported platforms are publicly available as web apps or open-source software. The introduction of nationwide electronic health records provides invaluable real-world data to detect unknown relationships between approved drug treatments and diseases.
机构:
Univ Nacl La Plata UNLP, Consejo Nacl Invest Cient & Tecn, Fac Ciencias Med, CONICET,Inst Invest Bioquim Plata INIBIOLP, La Plata, Argentina
Consejo Nacl Invest Cient & Tecn, Consejo Nacl Invest Cient & Tecn, Buenos Aires, DF, ArgentinaUniv Nacl La Plata UNLP, Consejo Nacl Invest Cient & Tecn, Fac Ciencias Med, CONICET,Inst Invest Bioquim Plata INIBIOLP, La Plata, Argentina
Belgamo, Julian A.
Alberca, Lucas N.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Nacl La Plata UNLP, Lab Bioact Res & Dev LIDeB, Fac Exact Sci, Buenos Aires, DF, Argentina
Consejo Nacl Invest Cient & Tecn, Consejo Nacl Invest Cient & Tecn, Buenos Aires, DF, ArgentinaUniv Nacl La Plata UNLP, Consejo Nacl Invest Cient & Tecn, Fac Ciencias Med, CONICET,Inst Invest Bioquim Plata INIBIOLP, La Plata, Argentina
Alberca, Lucas N.
Porfido, Jorge L.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Nacl La Plata UNLP, Consejo Nacl Invest Cient & Tecn, Fac Ciencias Med, CONICET,Inst Invest Bioquim Plata INIBIOLP, La Plata, Argentina
Inst Pasteur Montevideo, Montevideo, UruguayUniv Nacl La Plata UNLP, Consejo Nacl Invest Cient & Tecn, Fac Ciencias Med, CONICET,Inst Invest Bioquim Plata INIBIOLP, La Plata, Argentina
Porfido, Jorge L.
Romero, Franco N. Caram
论文数: 0引用数: 0
h-index: 0
机构:
Univ Nacl La Plata UNLP, Lab Bioact Res & Dev LIDeB, Fac Exact Sci, Buenos Aires, DF, ArgentinaUniv Nacl La Plata UNLP, Consejo Nacl Invest Cient & Tecn, Fac Ciencias Med, CONICET,Inst Invest Bioquim Plata INIBIOLP, La Plata, Argentina
Romero, Franco N. Caram
Rodriguez, Santiago
论文数: 0引用数: 0
h-index: 0
机构:
Univ Nacl La Plata UNLP, Consejo Nacl Invest Cient & Tecn, Fac Ciencias Med, CONICET,Inst Invest Bioquim Plata INIBIOLP, La Plata, Argentina
Consejo Nacl Invest Cient & Tecn, Consejo Nacl Invest Cient & Tecn, Buenos Aires, DF, ArgentinaUniv Nacl La Plata UNLP, Consejo Nacl Invest Cient & Tecn, Fac Ciencias Med, CONICET,Inst Invest Bioquim Plata INIBIOLP, La Plata, Argentina
Rodriguez, Santiago
Talevi, Alan
论文数: 0引用数: 0
h-index: 0
机构:
Univ Nacl La Plata UNLP, Lab Bioact Res & Dev LIDeB, Fac Exact Sci, Buenos Aires, DF, Argentina
Consejo Nacl Invest Cient & Tecn, Consejo Nacl Invest Cient & Tecn, Buenos Aires, DF, ArgentinaUniv Nacl La Plata UNLP, Consejo Nacl Invest Cient & Tecn, Fac Ciencias Med, CONICET,Inst Invest Bioquim Plata INIBIOLP, La Plata, Argentina
Talevi, Alan
Corsico, Betina
论文数: 0引用数: 0
h-index: 0
机构:
Univ Nacl La Plata UNLP, Consejo Nacl Invest Cient & Tecn, Fac Ciencias Med, CONICET,Inst Invest Bioquim Plata INIBIOLP, La Plata, Argentina
Consejo Nacl Invest Cient & Tecn, Consejo Nacl Invest Cient & Tecn, Buenos Aires, DF, ArgentinaUniv Nacl La Plata UNLP, Consejo Nacl Invest Cient & Tecn, Fac Ciencias Med, CONICET,Inst Invest Bioquim Plata INIBIOLP, La Plata, Argentina
Corsico, Betina
Franchini, Gisela R.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Nacl La Plata UNLP, Consejo Nacl Invest Cient & Tecn, Fac Ciencias Med, CONICET,Inst Invest Bioquim Plata INIBIOLP, La Plata, Argentina
Consejo Nacl Invest Cient & Tecn, Consejo Nacl Invest Cient & Tecn, Buenos Aires, DF, ArgentinaUniv Nacl La Plata UNLP, Consejo Nacl Invest Cient & Tecn, Fac Ciencias Med, CONICET,Inst Invest Bioquim Plata INIBIOLP, La Plata, Argentina
机构:
Hong Kong Polytech Univ, Dept Appl Biol & Chem Technol, Kowloon, Hong Kong, Peoples R ChinaHong Kong Polytech Univ, Dept Appl Biol & Chem Technol, Kowloon, Hong Kong, Peoples R China
机构:
AstraZeneca, Innovat Med & Early Dev, Macclesfield SK10 4TG, Cheshire, EnglandAstraZeneca, Innovat Med & Early Dev, Macclesfield SK10 4TG, Cheshire, England
Cook, David
Brown, Dearg
论文数: 0引用数: 0
h-index: 0
机构:
AstraZeneca, Innovat Med & Early Dev, Macclesfield SK10 4TG, Cheshire, EnglandAstraZeneca, Innovat Med & Early Dev, Macclesfield SK10 4TG, Cheshire, England
Brown, Dearg
Alexander, Robert
论文数: 0引用数: 0
h-index: 0
机构:
AstraZeneca, Innovat Med & Early Dev, Cambridge, MA 02139 USAAstraZeneca, Innovat Med & Early Dev, Macclesfield SK10 4TG, Cheshire, England
Alexander, Robert
March, Ruth
论文数: 0引用数: 0
h-index: 0
机构:
AstraZeneca, Innovat Med & Early Dev, Macclesfield SK10 4TG, Cheshire, EnglandAstraZeneca, Innovat Med & Early Dev, Macclesfield SK10 4TG, Cheshire, England
March, Ruth
Morgan, Paul
论文数: 0引用数: 0
h-index: 0
机构:
AstraZeneca, Innovat Med & Early Dev, Macclesfield SK10 4TG, Cheshire, EnglandAstraZeneca, Innovat Med & Early Dev, Macclesfield SK10 4TG, Cheshire, England
Morgan, Paul
Satterthwaite, Gemma
论文数: 0引用数: 0
h-index: 0
机构:
AstraZeneca, Innovat Med & Early Dev, Macclesfield SK10 4TG, Cheshire, EnglandAstraZeneca, Innovat Med & Early Dev, Macclesfield SK10 4TG, Cheshire, England
Satterthwaite, Gemma
Pangalos, Menelas N.
论文数: 0引用数: 0
h-index: 0
机构:
AstraZeneca, Innovat Med & Early Dev, Macclesfield SK10 4TG, Cheshire, EnglandAstraZeneca, Innovat Med & Early Dev, Macclesfield SK10 4TG, Cheshire, England
机构:
Univ Cincinnati, Div Pharmaceut Sci, James L Winkle Coll Pharm, Acad Hlth Ctr, Cincinnati, OH 45267 USAUniv Cincinnati, Div Pharmaceut Sci, James L Winkle Coll Pharm, Acad Hlth Ctr, Cincinnati, OH 45267 USA
Dey, Avijit
Kang, Xu
论文数: 0引用数: 0
h-index: 0
机构:
Univ Cincinnati, Div Pharmaceut Sci, James L Winkle Coll Pharm, Acad Hlth Ctr, Cincinnati, OH 45267 USAUniv Cincinnati, Div Pharmaceut Sci, James L Winkle Coll Pharm, Acad Hlth Ctr, Cincinnati, OH 45267 USA
Kang, Xu
Qiu, Jiange
论文数: 0引用数: 0
h-index: 0
机构:
Univ Cincinnati, Div Pharmaceut Sci, James L Winkle Coll Pharm, Acad Hlth Ctr, Cincinnati, OH 45267 USAUniv Cincinnati, Div Pharmaceut Sci, James L Winkle Coll Pharm, Acad Hlth Ctr, Cincinnati, OH 45267 USA
Qiu, Jiange
Du, Yifeng
论文数: 0引用数: 0
h-index: 0
机构:
Univ Cincinnati, Div Pharmaceut Sci, James L Winkle Coll Pharm, Acad Hlth Ctr, Cincinnati, OH 45267 USAUniv Cincinnati, Div Pharmaceut Sci, James L Winkle Coll Pharm, Acad Hlth Ctr, Cincinnati, OH 45267 USA
Du, Yifeng
Jiang, Jianxiong
论文数: 0引用数: 0
h-index: 0
机构:
Univ Cincinnati, Div Pharmaceut Sci, James L Winkle Coll Pharm, Acad Hlth Ctr, Cincinnati, OH 45267 USAUniv Cincinnati, Div Pharmaceut Sci, James L Winkle Coll Pharm, Acad Hlth Ctr, Cincinnati, OH 45267 USA
机构:
Tufts Univ, Tufts Ctr Study Drug Dev, 75 Kneeland St,Suite 1100, Boston, MA 02111 USATufts Univ, Tufts Ctr Study Drug Dev, 75 Kneeland St,Suite 1100, Boston, MA 02111 USA
DiMasi, Joseph A.
Grabowski, Henry G.
论文数: 0引用数: 0
h-index: 0
机构:
Duke Univ, Dept Econ, Durham, NC 27706 USATufts Univ, Tufts Ctr Study Drug Dev, 75 Kneeland St,Suite 1100, Boston, MA 02111 USA
Grabowski, Henry G.
Hansen, Ronald W.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Rochester, Simon Business Sch, Rochester, NY 14627 USATufts Univ, Tufts Ctr Study Drug Dev, 75 Kneeland St,Suite 1100, Boston, MA 02111 USA
机构:
Univ Nacl La Plata UNLP, Consejo Nacl Invest Cient & Tecn, Fac Ciencias Med, CONICET,Inst Invest Bioquim Plata INIBIOLP, La Plata, Argentina
Consejo Nacl Invest Cient & Tecn, Consejo Nacl Invest Cient & Tecn, Buenos Aires, DF, ArgentinaUniv Nacl La Plata UNLP, Consejo Nacl Invest Cient & Tecn, Fac Ciencias Med, CONICET,Inst Invest Bioquim Plata INIBIOLP, La Plata, Argentina
Belgamo, Julian A.
Alberca, Lucas N.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Nacl La Plata UNLP, Lab Bioact Res & Dev LIDeB, Fac Exact Sci, Buenos Aires, DF, Argentina
Consejo Nacl Invest Cient & Tecn, Consejo Nacl Invest Cient & Tecn, Buenos Aires, DF, ArgentinaUniv Nacl La Plata UNLP, Consejo Nacl Invest Cient & Tecn, Fac Ciencias Med, CONICET,Inst Invest Bioquim Plata INIBIOLP, La Plata, Argentina
Alberca, Lucas N.
Porfido, Jorge L.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Nacl La Plata UNLP, Consejo Nacl Invest Cient & Tecn, Fac Ciencias Med, CONICET,Inst Invest Bioquim Plata INIBIOLP, La Plata, Argentina
Inst Pasteur Montevideo, Montevideo, UruguayUniv Nacl La Plata UNLP, Consejo Nacl Invest Cient & Tecn, Fac Ciencias Med, CONICET,Inst Invest Bioquim Plata INIBIOLP, La Plata, Argentina
Porfido, Jorge L.
Romero, Franco N. Caram
论文数: 0引用数: 0
h-index: 0
机构:
Univ Nacl La Plata UNLP, Lab Bioact Res & Dev LIDeB, Fac Exact Sci, Buenos Aires, DF, ArgentinaUniv Nacl La Plata UNLP, Consejo Nacl Invest Cient & Tecn, Fac Ciencias Med, CONICET,Inst Invest Bioquim Plata INIBIOLP, La Plata, Argentina
Romero, Franco N. Caram
Rodriguez, Santiago
论文数: 0引用数: 0
h-index: 0
机构:
Univ Nacl La Plata UNLP, Consejo Nacl Invest Cient & Tecn, Fac Ciencias Med, CONICET,Inst Invest Bioquim Plata INIBIOLP, La Plata, Argentina
Consejo Nacl Invest Cient & Tecn, Consejo Nacl Invest Cient & Tecn, Buenos Aires, DF, ArgentinaUniv Nacl La Plata UNLP, Consejo Nacl Invest Cient & Tecn, Fac Ciencias Med, CONICET,Inst Invest Bioquim Plata INIBIOLP, La Plata, Argentina
Rodriguez, Santiago
Talevi, Alan
论文数: 0引用数: 0
h-index: 0
机构:
Univ Nacl La Plata UNLP, Lab Bioact Res & Dev LIDeB, Fac Exact Sci, Buenos Aires, DF, Argentina
Consejo Nacl Invest Cient & Tecn, Consejo Nacl Invest Cient & Tecn, Buenos Aires, DF, ArgentinaUniv Nacl La Plata UNLP, Consejo Nacl Invest Cient & Tecn, Fac Ciencias Med, CONICET,Inst Invest Bioquim Plata INIBIOLP, La Plata, Argentina
Talevi, Alan
Corsico, Betina
论文数: 0引用数: 0
h-index: 0
机构:
Univ Nacl La Plata UNLP, Consejo Nacl Invest Cient & Tecn, Fac Ciencias Med, CONICET,Inst Invest Bioquim Plata INIBIOLP, La Plata, Argentina
Consejo Nacl Invest Cient & Tecn, Consejo Nacl Invest Cient & Tecn, Buenos Aires, DF, ArgentinaUniv Nacl La Plata UNLP, Consejo Nacl Invest Cient & Tecn, Fac Ciencias Med, CONICET,Inst Invest Bioquim Plata INIBIOLP, La Plata, Argentina
Corsico, Betina
Franchini, Gisela R.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Nacl La Plata UNLP, Consejo Nacl Invest Cient & Tecn, Fac Ciencias Med, CONICET,Inst Invest Bioquim Plata INIBIOLP, La Plata, Argentina
Consejo Nacl Invest Cient & Tecn, Consejo Nacl Invest Cient & Tecn, Buenos Aires, DF, ArgentinaUniv Nacl La Plata UNLP, Consejo Nacl Invest Cient & Tecn, Fac Ciencias Med, CONICET,Inst Invest Bioquim Plata INIBIOLP, La Plata, Argentina
机构:
Hong Kong Polytech Univ, Dept Appl Biol & Chem Technol, Kowloon, Hong Kong, Peoples R ChinaHong Kong Polytech Univ, Dept Appl Biol & Chem Technol, Kowloon, Hong Kong, Peoples R China
机构:
AstraZeneca, Innovat Med & Early Dev, Macclesfield SK10 4TG, Cheshire, EnglandAstraZeneca, Innovat Med & Early Dev, Macclesfield SK10 4TG, Cheshire, England
Cook, David
Brown, Dearg
论文数: 0引用数: 0
h-index: 0
机构:
AstraZeneca, Innovat Med & Early Dev, Macclesfield SK10 4TG, Cheshire, EnglandAstraZeneca, Innovat Med & Early Dev, Macclesfield SK10 4TG, Cheshire, England
Brown, Dearg
Alexander, Robert
论文数: 0引用数: 0
h-index: 0
机构:
AstraZeneca, Innovat Med & Early Dev, Cambridge, MA 02139 USAAstraZeneca, Innovat Med & Early Dev, Macclesfield SK10 4TG, Cheshire, England
Alexander, Robert
March, Ruth
论文数: 0引用数: 0
h-index: 0
机构:
AstraZeneca, Innovat Med & Early Dev, Macclesfield SK10 4TG, Cheshire, EnglandAstraZeneca, Innovat Med & Early Dev, Macclesfield SK10 4TG, Cheshire, England
March, Ruth
Morgan, Paul
论文数: 0引用数: 0
h-index: 0
机构:
AstraZeneca, Innovat Med & Early Dev, Macclesfield SK10 4TG, Cheshire, EnglandAstraZeneca, Innovat Med & Early Dev, Macclesfield SK10 4TG, Cheshire, England
Morgan, Paul
Satterthwaite, Gemma
论文数: 0引用数: 0
h-index: 0
机构:
AstraZeneca, Innovat Med & Early Dev, Macclesfield SK10 4TG, Cheshire, EnglandAstraZeneca, Innovat Med & Early Dev, Macclesfield SK10 4TG, Cheshire, England
Satterthwaite, Gemma
Pangalos, Menelas N.
论文数: 0引用数: 0
h-index: 0
机构:
AstraZeneca, Innovat Med & Early Dev, Macclesfield SK10 4TG, Cheshire, EnglandAstraZeneca, Innovat Med & Early Dev, Macclesfield SK10 4TG, Cheshire, England
机构:
Univ Cincinnati, Div Pharmaceut Sci, James L Winkle Coll Pharm, Acad Hlth Ctr, Cincinnati, OH 45267 USAUniv Cincinnati, Div Pharmaceut Sci, James L Winkle Coll Pharm, Acad Hlth Ctr, Cincinnati, OH 45267 USA
Dey, Avijit
Kang, Xu
论文数: 0引用数: 0
h-index: 0
机构:
Univ Cincinnati, Div Pharmaceut Sci, James L Winkle Coll Pharm, Acad Hlth Ctr, Cincinnati, OH 45267 USAUniv Cincinnati, Div Pharmaceut Sci, James L Winkle Coll Pharm, Acad Hlth Ctr, Cincinnati, OH 45267 USA
Kang, Xu
Qiu, Jiange
论文数: 0引用数: 0
h-index: 0
机构:
Univ Cincinnati, Div Pharmaceut Sci, James L Winkle Coll Pharm, Acad Hlth Ctr, Cincinnati, OH 45267 USAUniv Cincinnati, Div Pharmaceut Sci, James L Winkle Coll Pharm, Acad Hlth Ctr, Cincinnati, OH 45267 USA
Qiu, Jiange
Du, Yifeng
论文数: 0引用数: 0
h-index: 0
机构:
Univ Cincinnati, Div Pharmaceut Sci, James L Winkle Coll Pharm, Acad Hlth Ctr, Cincinnati, OH 45267 USAUniv Cincinnati, Div Pharmaceut Sci, James L Winkle Coll Pharm, Acad Hlth Ctr, Cincinnati, OH 45267 USA
Du, Yifeng
Jiang, Jianxiong
论文数: 0引用数: 0
h-index: 0
机构:
Univ Cincinnati, Div Pharmaceut Sci, James L Winkle Coll Pharm, Acad Hlth Ctr, Cincinnati, OH 45267 USAUniv Cincinnati, Div Pharmaceut Sci, James L Winkle Coll Pharm, Acad Hlth Ctr, Cincinnati, OH 45267 USA
机构:
Tufts Univ, Tufts Ctr Study Drug Dev, 75 Kneeland St,Suite 1100, Boston, MA 02111 USATufts Univ, Tufts Ctr Study Drug Dev, 75 Kneeland St,Suite 1100, Boston, MA 02111 USA
DiMasi, Joseph A.
Grabowski, Henry G.
论文数: 0引用数: 0
h-index: 0
机构:
Duke Univ, Dept Econ, Durham, NC 27706 USATufts Univ, Tufts Ctr Study Drug Dev, 75 Kneeland St,Suite 1100, Boston, MA 02111 USA
Grabowski, Henry G.
Hansen, Ronald W.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Rochester, Simon Business Sch, Rochester, NY 14627 USATufts Univ, Tufts Ctr Study Drug Dev, 75 Kneeland St,Suite 1100, Boston, MA 02111 USA