Potential and limits of (mal)adaptive mutation rate plasticity in plants

被引:3
作者
Monroe, J. Grey [1 ]
机构
[1] Univ Calif Davis, Dept Plant Sci, Davis, CA 95616 USA
关键词
DNA repair; environmental adaptation; epigenomics; evolution; mutation; plasticity; transposable elements; GENE-EXPRESSION; EVOLUTION;
D O I
10.1111/nph.18640
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Genetic mutations provide the heritable material for plant adaptation to their environments. At the same time, the environment can affect the mutation rate across plant genomes. However, the extent to which environmental plasticity in mutation rates can facilitate or hinder adaptation remains a longstanding and unresolved question. Emerging discoveries of mechanisms affecting mutation rate variability provide opportunities to consider this question in a new light. Links between chromatin states, transposable elements, and DNA repair suggest cases of adaptive mutation rate plasticity could occur. Yet, numerous evolutionary and biological forces are expected to limit the impact of any such mutation rate plasticity on adaptive evolution. Persistent uncertainty about the significance of mutation rate plasticity on adaptation motivates new experimental and theoretical research relevant to understanding plant responses in changing environments.
引用
收藏
页码:2020 / 2026
页数:7
相关论文
共 55 条
[1]  
An Y., 2020, DYNAMIC EPIGENOME CH, DOI [10.22541/au.160336987.75933449/v1, DOI 10.22541/AU.160336987.75933449/V1]
[2]   Genetic and environmental modulation of transposition shapes the evolutionary potential of Arabidopsis thaliana [J].
Baduel, Pierre ;
Leduque, Basile ;
Ignace, Amandine ;
Gy, Isabelle ;
Gil, Jose ;
Loudet, Olivier ;
Colot, Vincent ;
Quadrana, Leandro .
GENOME BIOLOGY, 2021, 22 (01)
[3]  
Belfield EJ, 2021, GENOME RES, V31, P40, DOI [10.1101/gr.259853.119, 10.1101/gr.259853.119.]
[4]   DNA mismatch repair preferentially protects genes from mutation [J].
Belfield, Eric J. ;
Ding, Zhong Jie ;
Jamieson, Fiona J. C. ;
Visscher, Anne M. ;
Zheng, Shao Jian ;
Mithani, Aziz ;
Harberd, Nicholas P. .
GENOME RESEARCH, 2018, 28 (01) :66-74
[5]   On the origin and evolutionary consequences of gene body DNA methylation [J].
Bewick, Adam J. ;
Ji, Lexiang ;
Niederhuth, Chad E. ;
Willing, Eva-Maria ;
Hofmeister, Brigitte T. ;
Shi, Xiuling ;
Wang, Li ;
Lu, Zefu ;
Rohr, Nicholas A. ;
Hartwig, Benjamin ;
Kiefer, Christiane ;
Deal, Roger B. ;
Schmutz, Jeremy ;
Grimwood, Jane ;
Stroud, Hume ;
Jacobsen, Steven E. ;
Schneeberger, Korbinian ;
Zhang, Xiaoyu ;
Schmitz, Robert J. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2016, 113 (32) :9111-9116
[6]  
Boukas L., 2022, BIORXIV, DOI DOI 10.1101/2020.07.04.187880
[7]   Transposable element insertion: a hidden major source of domesticated phenotypic variation in Brassica rapa [J].
Cai, Xu ;
Lin, Runmao ;
Liang, Jianli ;
King, Graham J. ;
Wu, Jian ;
Wang, Xiaowu .
PLANT BIOTECHNOLOGY JOURNAL, 2022, 20 (07) :1298-1310
[8]  
CARTLEDGE J. L., 1936, PROC AMER PHIL SOC, V76, P663
[9]   The important contribution of transposable elements to phenotypic variation and evolution [J].
Catlin, Nathan S. ;
Josephs, Emily B. .
CURRENT OPINION IN PLANT BIOLOGY, 2022, 65
[10]   Arabidopsis meiotic crossover hot spots overlap with H2A. Z nucleosomes at gene promoters [J].
Choi, Kyuha ;
Zhao, Xiaohui ;
Kelly, Krystyna A. ;
Venn, Oliver ;
Higgins, James D. ;
Yelina, Nataliya E. ;
Hardcastle, Thomas J. ;
Ziolkowski, Piotr A. ;
Copenhaver, Gregory P. ;
Franklin, F. Chris H. ;
McVean, Gil ;
Henderson, Ian R. .
NATURE GENETICS, 2013, 45 (11) :1327-+