Synthesis, characterization, crystal structure, in silico and computational studies on a novel Schiff base derived from α-chlorocinnamaldehyde and 4-aminoantipyrine

被引:2
作者
Adimudo, Hillary Chijioke [1 ]
Agu, Chidike Justus [1 ]
Okenyeka, Obinna U. [1 ]
Eddy, Nnabuk O. [1 ]
Dim, Ebubechukwu Nnamdi [1 ]
Dege, Necmi [3 ]
Bonardd, Sebastian [4 ,5 ]
Vanka, Kumar [6 ,7 ]
Ibezim, Akachukwu [8 ]
Idika, Digbo Iku [2 ]
Diaz, David Diaz [4 ,5 ]
Obasi, Nnamdi Lawrence [1 ,2 ]
机构
[1] Univ Nigeria, Fac Phys Sci, Dept Pure & Ind Chem, Nsukka 410001, Enugu State, Nigeria
[2] Babcock Univ, Dept Basic Sci, Ikenne, Ogun State, Nigeria
[3] Ondokuz Mayis Univ, Fac Sci, Dept Phys, TR-55139 Samsun, Turkiye
[4] Univ La Laguna, Dept Quim Organ, Avda Astrofisico Francisco Sanchez, Tenerife 38206, Spain
[5] Univ La Laguna, Inst Univ Bioorgan Antonio Gonzalez, Avda Astrofisico Francisco Sanchez, Tenerife 38206, Spain
[6] CSIR Natl Chem Lab, Phys & Mat Chem Div, Dr Homi Bhabha Rd, Pune 411008, Maharashtra, India
[7] Acad Sci & Innovat Res AcSIR, Ghaziabad 201002, India
[8] Univ Nigeria, Dept Pharmaceut & Med Chem, Nsukka, Enugu State, Nigeria
关键词
Schiff base; X-ray crystallography; Computational studies; Molecular modeling; ANTICANCER; INHIBITORS; COMPLEXES; CINNAMALDEHYDE; DERIVATIVES;
D O I
10.1016/j.molstruc.2023.135928
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Schiff base, 4-(((1E,2Z)-2-chloro-3-phenylallylidene)amino)-1,5-dimethyl-2-phenyl-1,2-dihydro-3H-pyrazol-3-one (1) was synthesized by condensation reaction of 4-aminoantipyrine and & alpha;-chlorocinnamaldehyde. The compound was characterized using Fourier-transform infrared spectroscopy (FT-IR), ultraviolet (UV)-visible spectroscopy, proton and carbon nuclear magnetic resonance spectroscopy (1H/13C NMR) and single-crystal X-ray diffraction analysis (SC-XRD). Density functional theory (DFT) was used to compute molecular parameters and also compared them with experimental data. The X-ray diffraction data revealed that the compound crys-tallizes as a monoclinic crystal system with a space group of C2/c and Z = 8, and is stabilized by C12-H12MIDLINE HORIZONTAL ELLIPSISO1, and C8-H8AMIDLINE HORIZONTAL ELLIPSISO1 intramolecular hydrogen bonds. The presence of a distinctive azomethine C = N bond length N3-C12 of 1.283(3) & ANGS;, and 1640 cm-1 stretching vibration in the FT-IR spectrum are evidence of the formation of a Schiff base. The computational result indicates that the ionization energy (IE), and electron affinity (EA) values for the molecule are 4.025 and 2.110 eV, respectively. The positive value of EA suggests that the addition of an electron to the molecule would be an exothermic process. The evaluated energy is relatively low and is an expression of the ease of electron transfer from the highest occupied molecular orbital (HOMO) to the lowest unoccupied molecular orbital (LUMO). Hirsfeld surface map over dnorm and curvedness surface indicated the presence of 7C-7C stacking while the shape factor index suggests donor and acceptor intermolecular C-H-7C. Analysis of Hirsfeld surfaces concerning the fingerprint indicated a minimal contribution from the de -di pair and reveals H--H as a major contribution to the Hirsfeld surface. However, the molecular packing did not confirm H--H as a significant contributor the packing. Docking calculations on the compound showed average theoretical binding energies toward aromatase (-5.99 & PLUSMN; 0.34 kcal/mol) and fibroblast growth factor receptor (FGFR) (-17.57 & PLUSMN; 6.85 kcal/mol), indicating binding interactions with both protein targets.
引用
收藏
页数:9
相关论文
共 45 条
[1]   Influence of halogen substitution on crystal packing, molecular properties and electrochemical sensing [J].
Ahangar, Aadil A. ;
Elancheran, R. ;
Dar, Aijaz A. .
JOURNAL OF SOLID STATE CHEMISTRY, 2022, 314
[2]   The Electron Affinity as the Highest Occupied Anion Orbital Energy with a Sufficiently Accurate Approximation of the Exact Kohn-Sham Potential [J].
Amati, M. ;
Stoia, S. ;
Baerends, E. J. .
JOURNAL OF CHEMICAL THEORY AND COMPUTATION, 2020, 16 (01) :443-452
[3]  
[Anonymous], 2014, MOL OP ENV MOE SOFTW
[4]   Synthesis, structure, computational and in-silico anticancer studies of N,N-diethyl-N′-palmitoylthiourea [J].
Asegbeloyin, Jonnie Niyi ;
Oyeka, Ebube Evaristus ;
Okpareke, Obinna ;
Ibezim, Akachukwu .
JOURNAL OF MOLECULAR STRUCTURE, 2018, 1153 :69-77
[5]  
Ashraf MA, 2011, CHEMISTRY AND CHEMICAL PROCESS, P1
[6]  
Band Y.B., 2013, Quantum Mech. with Appl. to Nanotechnol. Inf. Sci, P545
[7]   The Protein Data Bank [J].
Berman, HM ;
Westbrook, J ;
Feng, Z ;
Gilliland, G ;
Bhat, TN ;
Weissig, H ;
Shindyalov, IN ;
Bourne, PE .
NUCLEIC ACIDS RESEARCH, 2000, 28 (01) :235-242
[8]   Ancistrotanzanine C and related 5,1′- and 7,3′-coupled naphthylisoquinoline alkaloids from Ancistrocladus tanzaniensis [J].
Bringmann, G ;
Dreyer, M ;
Faber, JH ;
Dalsgaard, PW ;
Staerk, D ;
Jaroszewski, JW ;
Ndangalasi, H ;
Mbago, F ;
Brun, R ;
Christensen, SB .
JOURNAL OF NATURAL PRODUCTS, 2004, 67 (05) :743-748
[9]   Alpha-Substituted Derivatives of Cinnamaldehyde as Tyrosinase Inhibitors: Inhibitory Mechanism and Molecular Analysis [J].
Cui, Yi ;
Liang, Ge ;
Hu, Yong-Hua ;
Shi, Yan ;
Cai, Yi-Xiang ;
Gao, Huan-Juan ;
Chen, Qing-Xi ;
Wang, Qin .
JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, 2015, 63 (02) :716-722
[10]  
De Souza AO, 2007, QUIM NOVA, V30, P1563, DOI 10.1590/S0100-40422007000700012