GADD45B predicts lung squamous cell carcinoma survival and impacts immune infiltration, and T cell exhaustion

被引:6
作者
Lv, Ying [1 ]
Liu, Zeyu [2 ]
Xiong, Kai [3 ]
Duan, Hailing [4 ]
Yang, Jiuyu [1 ,6 ]
Liao, Pan [5 ,7 ]
机构
[1] Univ Nationalities, Inner Mongolia Forestry Gen Hosp, Clin Med Sch Inner Mongolia 2, Dept Cardiol, Yakeshi, Inner Mongolia, Peoples R China
[2] Univ Nationalities, Inner Mongolia Forestry Gen Hosp, Clin Med Sch Inner Mongolia 2, Dept Cardiothorac Surg, Yakeshi, Inner Mongolia, Peoples R China
[3] Univ Nationalities, Inner Mongolia Forestry Gen Hosp, Clin Med Sch Inner Mongolia 2, Dept Stat, Yakeshi, Inner Mongolia, Peoples R China
[4] Univ Nationalities, Inner Mongolia Forestry Gen Hosp, Clin Med Sch Inner Mongolia 2, Dept Oncol, Yakeshi, Inner Mongolia, Peoples R China
[5] Nankai Univ, Sch Med, Tianjin, Peoples R China
[6] Inner Mongolia Forestry Gen Hosp, Dept Cardiol, 81 Lincheng Rd, Hulunbuir 022150, Peoples R China
[7] Nankai Univ, Sch Med, 94 Weijin Rd, Tianjin 300071, Peoples R China
关键词
Immune infiltration; Lung squamous cell carcinoma; prognosis; T cells exhaustion; GADD45B; CANCER; GENES;
D O I
10.1080/08916934.2023.2209706
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
Background: This study focussed on exploring the prognostic prediction performance of the growth arrest and DNA damage-inducible 45 beta (GADD45B) and its associations with T-cell activity and immune soakage in different malignancies, especially lung squamous cell carcinoma (LUSC). Methods: We applied TIMER database for comparing the expressions of GADD45B among different cancers. OncoLnc, Gene Expression Profiling Interactive Analysis 2 (GEPIA2), and Kaplan-Meier Plotter were utilised to evaluate the prognostic prediction performance of GADD45B. Besides, the associations of GADD45B with clinical stage, associated gene markers, and immune infiltration were examined through TISIDB, GEPIA2, and Tumour Immune Estimation Resource (TIMER). Biological processes (BPs) and KEGG enrichment analyses were performed to illustrate the possible role of GADD45B in LUSC. The miRWalk database was adopted to analyse the gene miRNA interaction network of GADD45B in LUSC. Results: GADD45B expression was decreased in most of the malignancies, with relation to the poor prognosis in LUSC. GADD45B also significantly affected the survival of LUSC subgroups divided by clinic data. GADD45B significantly correlates with and may stimulate T cell exhaustion in LUSC. Conclusions: GADD45B is a prognostic indicator in multiple tumours, especially in LUSC. Moreover, modulating GADD45B expression may improve immunotherapy efficacy in LUSC.
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页数:17
相关论文
共 57 条
[41]   Depletion of Plasmacytoid Dendritic Cells Inhibits Tumor Growth and Prevents Bone Metastasis of Breast Cancer Cells [J].
Sawant, Anandi ;
Hensel, Jonathan A. ;
Chanda, Diptiman ;
Harris, Brittney A. ;
Siegal, Gene P. ;
Maheshwari, Akhil ;
Ponnazhagan, Selvarangan .
JOURNAL OF IMMUNOLOGY, 2012, 189 (09) :4258-4265
[42]   Genome-wide association analysis identifies genetic correlates of immune infiltrates in solid tumors [J].
Siemers, Nathan O. ;
Holloway, James L. ;
Chang, Han ;
Chasalow, Scott D. ;
Ross-MacDonald, Petra B. ;
Voliva, Charles F. ;
Szustakowski, Joseph D. .
PLOS ONE, 2017, 12 (07)
[43]   Circulating cell-free nucleic acids and platelets as a liquid biopsy in the provision of personalized therapy for lung cancer patients [J].
Sorber, L. ;
Zwaenepoel, K. ;
Deschoolmeester, V. ;
Van Schil, P. E. Y. ;
Van Meerbeeck, J. ;
Lardon, F. ;
Rolfo, C. ;
Pauwels, P. .
LUNG CANCER, 2017, 107 :100-107
[44]   The role of tumour-associated macrophages in bone metastasis [J].
Sousa, Sofia ;
Maatta, Jorma .
JOURNAL OF BONE ONCOLOGY, 2016, 5 (03) :135-138
[45]   Dendritic Cell-Based Immunotherapy in Lung Cancer [J].
Stevens, Dieter ;
Ingels, Joline ;
Van Lint, Sandra ;
Vandekerckhove, Bart ;
Vermaelen, Karim .
FRONTIERS IN IMMUNOLOGY, 2021, 11
[46]   miRWalk: An online resource for prediction of microRNA binding sites [J].
Sticht, Carsten ;
De La Torre, Carolina ;
Parveen, Alisha ;
Gretz, Norbert .
PLOS ONE, 2018, 13 (10)
[47]   A family of stress-inducible GADD45-like proteins mediate activation of the stress-responsive MTK1/MEKK4 MAPKKK [J].
Takekawa, M ;
Saito, H .
CELL, 1998, 95 (04) :521-530
[48]   GEPIA2: an enhanced web server for large-scale expression profiling and interactive analysis [J].
Tang, Zefang ;
Kang, Boxi ;
Li, Chenwei ;
Chen, Tianxiang ;
Zhang, Zemin .
NUCLEIC ACIDS RESEARCH, 2019, 47 (W1) :W556-W560
[49]   Tissue-based map of the human proteome [J].
Uhlen, Mathias ;
Fagerberg, Linn ;
Hallstroem, Bjoern M. ;
Lindskog, Cecilia ;
Oksvold, Per ;
Mardinoglu, Adil ;
Sivertsson, Asa ;
Kampf, Caroline ;
Sjoestedt, Evelina ;
Asplund, Anna ;
Olsson, IngMarie ;
Edlund, Karolina ;
Lundberg, Emma ;
Navani, Sanjay ;
Szigyarto, Cristina Al-Khalili ;
Odeberg, Jacob ;
Djureinovic, Dijana ;
Takanen, Jenny Ottosson ;
Hober, Sophia ;
Alm, Tove ;
Edqvist, Per-Henrik ;
Berling, Holger ;
Tegel, Hanna ;
Mulder, Jan ;
Rockberg, Johan ;
Nilsson, Peter ;
Schwenk, Jochen M. ;
Hamsten, Marica ;
von Feilitzen, Kalle ;
Forsberg, Mattias ;
Persson, Lukas ;
Johansson, Fredric ;
Zwahlen, Martin ;
von Heijne, Gunnar ;
Nielsen, Jens ;
Ponten, Fredrik .
SCIENCE, 2015, 347 (6220)
[50]   LinkedOmics: analyzing multi-omics data within and across 32 cancer types [J].
Vasaikar, Suhas V. ;
Straub, Peter ;
Wang, Jing ;
Zhang, Bing .
NUCLEIC ACIDS RESEARCH, 2018, 46 (D1) :D956-D963