Deep multi-task learning structure for segmentation and classification of supratentorial brain tumors in MR images

被引:8
作者
Kordnoori, Shirin [1 ]
Sabeti, Maliheh [1 ]
Shakoor, Mohammad Hossein [2 ]
Moradi, Ehsan [3 ]
机构
[1] Islamic Azad Univ, Dept Comp Engn, North Tehran Branch, Tehran, Iran
[2] Arak Univ, Fac Engn, Dept Comp Engn, Arak, Iran
[3] Shahid Beheshti Univ Med Sci, Dept Neurosurg, Tehran, Iran
来源
INTERDISCIPLINARY NEUROSURGERY-ADVANCED TECHNIQUES AND CASE MANAGEMENT | 2024年 / 36卷
关键词
Brain tumor; Multi-task deep learning; Segmentation; Classification;
D O I
10.1016/j.inat.2023.101931
中图分类号
R74 [神经病学与精神病学];
学科分类号
摘要
Identification of brain tumors border and determination of their possible pathology in MR images is an important step in pre-operation analyzing of this serious medical condition. Manual segmentation and classification of brain tumors could be challenge full in neurosurgical practice because of vast differences between brain tumors characteristic such as shape, border irregularity, consistency and etc. as well as interobserver variations. To solve this problem, some automatic methods have been proposed for brain tumors segmentation or classification during recent years, but an intelligence-based method for simultaneous identification of tumor type and tumor border in MR images has not proposed till now. Here, we have planned a unique automatic model includes a common encoder for feature representation, one decoder for segmentation and a multi-layer perceptron for classification of three common primary brain tumors (meningiomas, gliomas and pituitary adenomas) in brain MR images. The proposed model was examined on a brain tumor images dataset and the output were evaluated in both multi-task and single-task learning model. The multi-task learning model gains significant improvement in simultaneous classification and segmentation of brain tumors with promising accuracy of 97% for each task. So, this model could serve as a primary screening tool for early diagnosis of common primary brain tumors in general practice with a high success rate.
引用
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页数:9
相关论文
共 26 条
[1]  
[Anonymous], About Us
[2]   GAS: A genetic atlas selection strategy in multi-atlas segmentation framework [J].
Antonelli, Michela ;
Cardoso, M. Jorge ;
Johnston, Edward W. ;
Appayya, Mrishta Brizmohun ;
Presles, Benoit ;
Modat, Marc ;
Punwani, Shonit ;
Ourselin, Sebastien .
MEDICAL IMAGE ANALYSIS, 2019, 52 :97-108
[3]   Data Descriptor: Advancing The Cancer Genome Atlas glioma MRI collections with expert segmentation labels and radiomic features [J].
Bakas, Spyridon ;
Akbari, Hamed ;
Sotiras, Aristeidis ;
Bilello, Michel ;
Rozycki, Martin ;
Kirby, Justin S. ;
Freymann, John B. ;
Farahani, Keyvan ;
Davatzikos, Christos .
SCIENTIFIC DATA, 2017, 4
[4]   Convolutional neural networks for brain tumour segmentation [J].
Bhandari, Abhishta ;
Koppen, Jarrad ;
Agzarian, Marc .
INSIGHTS INTO IMAGING, 2020, 11 (01)
[5]   Computer vision and deep learning techniques for pedestrian detection and tracking: A survey [J].
Brunetti, Antonio ;
Buongiorno, Domenico ;
Trotta, Gianpaolo Francesco ;
Bevilacqua, Vitoantonio .
NEUROCOMPUTING, 2018, 300 :17-33
[6]   RFDCR: Automated brain lesion segmentation using cascaded random forests with dense conditional random fields [J].
Chen, Gaoxiang ;
Li, Qun ;
Shi, Fuqian ;
Rekik, Islem ;
Pan, Zhifang .
NEUROIMAGE, 2020, 211
[7]   Enhanced Performance of Brain Tumor Classification via Tumor Region Augmentation and Partition (vol 10, e0140381, 2015) [J].
Cheng, Jun ;
Huang, Wei ;
Cao, Shuangliang ;
Yang, Ru ;
Yang, Wei ;
Yun, Zhaoqiang ;
Wang, Zhijian ;
Feng, Qianjin .
PLOS ONE, 2015, 10 (12)
[8]   AssemblyNet: A large ensemble of CNNs for 3D whole brain MRI segmentation [J].
Coupe, Pierrick ;
Mansencal, Boris ;
Clement, Michael ;
Giraud, Remi ;
de Senneville, Baudouin Denis ;
Ta, Vinh-Thong ;
Lepetit, Vincent ;
Manjon, Jose V. .
NEUROIMAGE, 2020, 219
[9]   Brain tumor segmentation with Deep Neural Networks [J].
Havaei, Mohammad ;
Davy, Axel ;
Warde-Farley, David ;
Biard, Antoine ;
Courville, Aaron ;
Bengio, Yoshua ;
Pal, Chris ;
Jodoin, Pierre-Marc ;
Larochelle, Hugo .
MEDICAL IMAGE ANALYSIS, 2017, 35 :18-31
[10]   Brain Tumors [J].
Herholz, Karl ;
Langen, Karl-Josef ;
Schiepers, Christiaan ;
Mountz, James M. .
SEMINARS IN NUCLEAR MEDICINE, 2012, 42 (06) :356-370