Molecular Analysis of Genetic Diversity and Structure of the Lablab (Lablab purpureus (L.) Sweet) Gene Pool Reveals Two Independent Routes of Domestication

被引:9
|
作者
Kongjaimun, Alisa [1 ]
Takahashi, Yu [2 ]
Yoshioka, Yosuke [3 ]
Tomooka, Norihiko [2 ]
Mongkol, Rachsawan [1 ]
Somta, Prakit [4 ]
机构
[1] Silpakorn Univ, Fac Anim Sci & Agr Technol, Phetchaburi IT Campus,1 Moo 3 Sampraya, Bangkok 10330, Thailand
[2] Natl Agr & Food Res Org, Genet Resources Ctr, Kannondai 2-1-2, Tsukuba, Ibaraki 3058602, Japan
[3] Univ Tsukuba, Fac Life & Environm Sci, 1-1-1 Tennodai, Tsukuba, Ibaraki 3058572, Japan
[4] Kasetsart Univ, Fac Agr Kamphaeng Saen, Dept Agron, Kamphaeng Saen Campus,1 Moo 6 Kamphaeng Saen, Bangkok 73140, Nakhon Pathom, Thailand
来源
PLANTS-BASEL | 2023年 / 12卷 / 01期
关键词
hyacinth bean; diversity; domestication; SSR; chloroplast; SSR MARKERS; GERMPLASM; COLLECTION; SOFTWARE; RAPD;
D O I
10.3390/plants12010057
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
In this study, genetic diversity and structure of 474 cultivated and 19 wild lablab (Lablab purpureus) accessions. were determined using 15 nuclear and 6 chloroplast SSR markers. The overall gene diversity was relatively low (0.3441). Gene diversity in the wild accessions (0.6059) was about two-folds greater than that in the cultivated accessions. In the wild accessions, gene diversity was greatest in the southern Africa, followed by East Africa. In the cultivated accessions, gene diversity was highest in the eastern Africa. The results suggested that South Africa is the center of origin and East Africa is the center of domestication of lablab. Different cluster analyses showed that 2-seeded-pod cultivated accessions (ssp. uncinatus) were clustered with wild accessions and that 4-(6)-seeded-pod cultivated accessions (ssp. purpureus and bengalensis) were intermingled. UPGMA tree suggested that ssp. purpureus and bengalensis were domesticated from 4-seeded-pod wild accessions of southern Africa. Haplotype network analysis based on nuclear SSRs revealed two domestication routes; the ssp. uncinatus is domesticated from 2-seeded-pod wild lablab (wild spp. uncinatus) from East Africa (Ethiopia), while the ssp. purpureus and bengalensis are domesticated from 4-seeded-pod wild lablab from Central Africa (Rwanda). These results are useful for understanding domestication and revising classification of lablab.
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页数:18
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