XMe- Xiamen Molecular Electronics Code: An Intelligent and Open-Source Data Analysis Tool for Single-Molecule Conductance Measurements

被引:32
作者
Pan, Zhichao [1 ,2 ,3 ]
Dong, Gang [1 ,2 ]
Shang, Chi [1 ,2 ]
Li, Ruihao [1 ,2 ]
Gao, Tengyang [1 ,2 ]
Lin, Luchun [1 ,2 ]
Duan, Huicong [1 ,2 ]
Li, Xiaohui [1 ,2 ]
Bai, Jie [1 ,2 ]
Lai, Yilin [1 ,2 ]
Wu, Wenfeng [1 ,2 ]
Shi, Jia [1 ,2 ]
Liu, Junyang [1 ,2 ]
Hong, Wenjing [1 ,2 ]
机构
[1] Xiamen Univ, Coll Chem & Chem Engn, State Key Lab Phys Chem Solid Surfaces, Xiamen 361005, Fujian, Peoples R China
[2] Xiamen Univ, Inst Artificial Intelligence, Xiamen 361005, Fujian, Peoples R China
[3] Guilin Univ Elect Technol, Sch Artificial Intelligence, Guilin 541004, Guangxi, Peoples R China
基金
美国国家科学基金会; 中国国家自然科学基金; 中央高校基本科研业务费专项资金资助;
关键词
Molecular electronics; Single-molecule studies; Break junction; Data science; Software; ENERGY-LEVEL ALIGNMENT; JUNCTION EVOLUTION; RECTIFICATION; TRANSPORT; ROBUST; RATIOS;
D O I
10.1002/cjoc.202300443
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Charge transport characterization of single-molecule junctions is essential for the fundamental research of single-molecule physical chemistry and the development towards single-molecule electronic devices and circuits. Among the single-molecule conductance characterization techniques, the single-molecule break junction technique is widely used in tens of worldwide research laboratories which can generate a large amount of experimental data from thousands of individual measurement cycles. However, data interpretation is a challenging task for researchers with different research backgrounds, and the different data analysis approaches sometimes lead to the misunderstanding of the measurement data and even reproducibility issues of the measurement. It is thus a necessity to develop a user-friendly all-in-one data analysis tool that automatizes the basic data analysis in a standard and widely accepted way. In this work, we present the XMe Code (Xiamen Molecular Electronics Code), an intelligent all-in-one data analysis tool for the comprehensive analysis of single-molecule break junction data. XMe code provides end-to-end data analysis that takes in the original experimental data and returns electronic characteristics and even charge transport mechanisms. We believe that XMe Code will promote the transparency of the data analysis in single-molecule electronics and the collaborations among scientists with different research backgrounds.
引用
收藏
页码:317 / 329
页数:13
相关论文
共 63 条
[1]   Flicker Noise as a Probe of Electronic Interaction at Metal-Single Molecule Interfaces [J].
Adak, Olgun ;
Rosenthal, Ethan ;
Meisner, Jeffer ;
Andrade, Erick F. ;
Pasupathy, Abhay N. ;
Nuckolls, Colin ;
Hybertsen, Mark S. ;
Venkataraman, Latha .
NANO LETTERS, 2015, 15 (06) :4143-4149
[2]   Improving the electrical performance of a conductive atomic force microscope with a logarithmic current-to-voltage converter [J].
Aguilera, L. ;
Lanza, M. ;
Porti, M. ;
Grifoll, J. ;
Nafria, M. ;
Aymerich, X. .
REVIEW OF SCIENTIFIC INSTRUMENTS, 2008, 79 (07)
[3]   Deep learning for single-molecule science [J].
Albrecht, Tim ;
Slabaugh, Gregory ;
Alonso, Eduardo ;
Al-Arif, S. M. Masudur R. .
NANOTECHNOLOGY, 2017, 28 (42)
[4]   Anti-resonance features of destructive quantum interference in single-molecule thiophene junctions achieved by electrochemical gating [J].
Bai, Jie ;
Daaoub, Abdalghani ;
Sangtarash, Sara ;
Li, Xiaohui ;
Tang, Yongxiang ;
Zou, Qi ;
Sadeghi, Hatef ;
Liu, Shuai ;
Huang, Xiaojuan ;
Tan, Zhibing ;
Liu, Junyang ;
Yang, Yang ;
Shi, Jia ;
Meszaros, Gabor ;
Chen, Wenbo ;
Lambert, Colin ;
Hong, Wenjing .
NATURE MATERIALS, 2019, 18 (04) :364-+
[5]   Tuning Rectification in Single-Molecular Diodes [J].
Batra, Arunabh ;
Darancet, Pierre ;
Chen, Qishui ;
Meisner, Jeffrey S. ;
Widawsky, Jonathan R. ;
Neaton, Jeffrey B. ;
Nuckolls, Colin ;
Venkataraman, Latha .
NANO LETTERS, 2013, 13 (12) :6233-6237
[6]   Trusting our machines: validating machine learning models for single-molecule transport experiments [J].
Bro-Jorgensen, William ;
Hamill, Joseph M. ;
Bro, Rasmus ;
Solomon, Gemma C. .
CHEMICAL SOCIETY REVIEWS, 2022, 51 (16) :6875-6892
[7]   A reference-free clustering method for the analysis of molecular break-junction measurements [J].
Cabosart, Damien ;
El Abbassi, Maria ;
Stefani, Davide ;
Frisenda, Riccardo ;
Calame, Michel ;
van der Zant, Herre S. J. ;
Perrin, Mickael L. .
APPLIED PHYSICS LETTERS, 2019, 114 (14)
[8]  
Capozzi B, 2015, NAT NANOTECHNOL, V10, P522, DOI [10.1038/nnano.2015.97, 10.1038/NNANO.2015.97]
[9]   Giant Conductance Enhancement of Intramolecular Circuits through Interchannel Gating [J].
Chen, Hongliang ;
Zheng, Haining ;
Hu, Chen ;
Cai, Kang ;
Jiao, Yang ;
Zhang, Long ;
Jiang, Feng ;
Roy, Indranil ;
Qiu, Yunyan ;
Shen, Dengke ;
Feng, Yuanning ;
Alsubaie, Fehaid M. ;
Guo, Hong ;
Hong, Wenjing ;
Stoddart, J. Fraser .
MATTER, 2020, 2 (02) :378-389
[10]   Large on-off ratios and negative differential resistance in a molecular electronic device [J].
Chen, J ;
Reed, MA ;
Rawlett, AM ;
Tour, JM .
SCIENCE, 1999, 286 (5444) :1550-1552