A novel EIF3C-related CD8+ T-cell signature in predicting prognosis and immunotherapy response of nasopharyngeal carcinoma

被引:0
作者
Li, Rui [1 ]
Wang, Yikai [1 ]
Wen, Xin [1 ,3 ]
Cheng, Binglin [1 ]
Lv, Ruxue [1 ]
Chen, Ruzhen [1 ]
Hu, Wen [1 ]
Wang, Yinglei [2 ]
Liu, Jingwen [2 ]
Lin, Bingyi [2 ]
Zhang, Haixiang [2 ]
Zhang, Enting [2 ]
Tang, XinRan [1 ]
机构
[1] Southern Med Univ, Nanfang Hosp, Dept Radiat Oncol, 1838 North Guangzhou Ave, Guangzhou 510515, Guangdong, Peoples R China
[2] Southern Med Univ, Sch Clin Med 1, Guangzhou 510515, Guangdong, Peoples R China
[3] Sun Yat Sen Univ, Affiliated Hosp 1, Guangzhou 510080, Guangdong, Peoples R China
基金
中国国家自然科学基金;
关键词
Nasopharyngeal carcinoma; EIF3C; CD8(+) T cells; Prognosis; Immunotherapy response; TRANSLATION INITIATION; EIF3C; MULTICENTER; SURVIVAL; SUBSETS; CXCR6;
D O I
10.1007/s00432-023-05552-x
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Purpose At present, dysfunctional CD8(+) T-cells in the nasopharyngeal carcinoma (NPC) tumor immune microenvironment (TIME) have caused unsatisfactory immunotherapeutic effects, such as a low response rate of anti-PD-L1 therapy. Therefore, there is an urgent need to identify reliable markers capable of accurately predicting immunotherapy efficacy. Methods Utilizing various algorithms for immune-infiltration evaluation, we explored the role of EIF3C in the TIME. We next found the influence of EIF3C expression on NPC based on functional analyses and RNA sequencing. By performing correlation and univariate Cox analyses of CD8(+) Tcell markers from scRNA-seq data, we identified four signatures, which were then used in conjunction with the lasso algorithm to determine corresponding coefficients in the resulting EIF3C-related CD8(+) T-cell signature (ETS). We subsequently evaluated the prognostic value of ETS using univariate and multivariate Cox regression analyses, Kaplan-Meier curves, and the area under the receiver operating characteristic curve (AUROC). Results Our results demonstrate a significant relationship between low expression of EIF3C and high levels of CD8(+) T-cell infiltration in the TIME, as well as a correlation between EIF3C expression and progression of NPC. Based on the expression levels of four EIF3C-related CD8(+) T-cell marker genes, we constructed the ETS predictive model for NPC prognosis, which demonstrated success in validation. Notably, our model can also serve as an accurate indicator for detecting immunotherapy response. Conclusion Our findings suggest that EIF3C plays a significant role in NPC progression and immune modulation, particularly in CD8(+) T-cell infiltration. Furthermore, the ETS model holds promise as both a prognostic predictor for NPC patients and a tool for adjusting individualized immunotherapy strategies.
引用
收藏
页数:16
相关论文
共 50 条
[21]   A novel pyroptosis-regulated gene signature for predicting prognosis and immunotherapy response in hepatocellular carcinoma [J].
Zhang, Baozhu ;
Wang, Zhan .
FRONTIERS IN MOLECULAR BIOSCIENCES, 2022, 9
[22]   Risk Signature Related to Immunotherapy Reaction of Hepatocellular Carcinoma Based on the Immune-Related Genes Associated With CD8+ T Cell Infiltration [J].
Zou, Yiping ;
Chen, Zhihong ;
Han, Hongwei ;
Ruan, Shiye ;
Jin, Liang ;
Zhang, Yuanpeng ;
Chen, Zhengrong ;
Ma, Zuyi ;
Lou, Qi ;
Shi, Ning ;
Jin, Haosheng .
FRONTIERS IN MOLECULAR BIOSCIENCES, 2021, 8
[23]   Predicting CD62L expression during the CD8+ T-cell response in vivo [J].
Schlub, Timothy E. ;
Badovinac, Vladimir P. ;
Sabel, Jaime T. ;
Harty, John T. ;
Davenport, Miles P. .
IMMUNOLOGY AND CELL BIOLOGY, 2010, 88 (02) :157-164
[24]   Establishment and evaluation cuproptosis-related gene signature for predicting the prognosis and immunotherapy response of hepatocellular carcinoma [J].
Shuo Wang ;
Xinzi Xue ;
Hongyan Bai ;
Junwen Qi ;
Sujuan Fei ;
Bei Miao .
Cancer Cell International, 25 (1)
[25]   A Novel Signature for Predicting Prognosis of Smoking-Related Squamous Cell Carcinoma [J].
Chen, Chang ;
Cheng, Xiaoqing ;
Li, Shuyan ;
Chen, Huanghui ;
Cui, Mengjing ;
Bian, Linlin ;
Jin, Hui .
FRONTIERS IN GENETICS, 2021, 12
[26]   Identification of a Novel Immune Landscape Signature for Predicting Prognosis and Response of Endometrial Carcinoma to Immunotherapy and Chemotherapy [J].
Liu, Jinhui ;
Wang, Yichun ;
Mei, Jie ;
Nie, Sipei ;
Zhang, Yan .
FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY, 2021, 9
[27]   A novel immune checkpoint-related seven-gene signature for predicting prognosis and immunotherapy response in melanoma [J].
Tian, Maolang ;
Yang, Jiangping ;
Han, Jiaqi ;
He, Jinlan ;
Liao, Wenjun .
INTERNATIONAL IMMUNOPHARMACOLOGY, 2020, 87
[28]   Integrated analysis revealing a novel stemness-metabolism-related gene signature for predicting prognosis and immunotherapy response in hepatocellular carcinoma [J].
Wang, Yuxin ;
Wan, Xueshuai ;
Du, Shunda .
FRONTIERS IN IMMUNOLOGY, 2023, 14
[29]   Identification of chromatin organization-related gene signature for hepatocellular carcinoma prognosis and predicting immunotherapy response [J].
Chen, Jingbo ;
Chen, Xingte ;
Li, Ting ;
Wang, Lei ;
Lin, Guishan .
INTERNATIONAL IMMUNOPHARMACOLOGY, 2022, 109
[30]   Identification of molecular subtypes based on PANoptosis-related genes and construction of a signature for predicting the prognosis and response to immunotherapy response in hepatocellular carcinoma [J].
Zhu, Jinfeng ;
Huang, Qian ;
Peng, Xingyu ;
Luo, Chen ;
Liu, Zitao ;
Liu, Dongdong ;
Yuan, Huazhao ;
Yuan, Rongfa ;
Cheng, Xuexin .
FRONTIERS IN IMMUNOLOGY, 2023, 14