Identification of endoplasmic reticulum stress-related lncRNAs in lung adenocarcinoma by bioinformatics and experimental validation

被引:4
作者
Xin, Tong [1 ]
Sun, Yue [1 ]
Meng, Hongxue [2 ]
Zhang, Ningzhi [1 ]
Peng, Bo [3 ]
Yang, Xinxin [4 ]
Hu, Jing [1 ,5 ]
Cao, Mengru [1 ,5 ]
机构
[1] Harbin Med Univ, Canc Hosp, Dept Med Oncol 4, Harbin, Peoples R China
[2] Harbin Med Univ, Canc Hosp, Dept Pathol, Harbin, Peoples R China
[3] Harbin Med Univ, Affiliated Hosp 2, Dept Thorac Surg, Harbin, Peoples R China
[4] Harbin Med Univ, Canc Hosp, Precis Med Ctr, Harbin, Peoples R China
[5] Harbin Med Univ, Canc Hosp, Dept Breast Med oncol, 150 Haping Rd, Harbin, Peoples R China
基金
中国国家自然科学基金;
关键词
Endoplasmic reticulum stress; prognosis; LncRNAs; lung adenocarcinoma; TUMOR MUTATIONAL BURDEN; HEPATOCELLULAR-CARCINOMA; PROMOTES; CANCER; TUMORIGENESIS; GROWTH;
D O I
10.1080/07853890.2023.2251500
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Background: Endoplasmic reticulum stress (ERs) is an important cellular self-defence mechanism, which is closely related to tumorigenesis and development. However, the role of endoplasmic reticulum stress state in the development of lung adenocarcinoma (LUAD) has not been clarified.Methods: The lncRNAs associated with endoplasmic reticulum stress were identified by co-expression analysis in public databases, and by the least absolute shrinkage and selection operator (LASSO) regression and multivariate Cox regression modelling, we constructed a prognostic model based on endoplasmic reticulum stress-related lncRNAs (ERs-related lncRNAs), performed immune analysis, TME, TMB and clinical drug prediction for model-related risk scores, and performed correlation validation in public databases and at the human tissue level.Results: Five ERs-related lncRNAs were used to construct an ERs-related lncRNA signature (ERs-related LncSig), which can predict the prognosis of LUAD. Patients in the high-risk group had worse survival, and differences existed in immune cell infiltration, immune function, immune checkpoint analysis, tumour microenvironment (TME), tumour mutational burden (TMB), immunotherapy efficacy, and sensitivity to some commonly used chemotherapeutic agents between high and low risk groups.Conclusion: Our study demonstrated that ERs-related lncRNA signature can be used for the prognostic evaluation of LUAD patients and may provide new insights into clinical decision-making and personalised medicine for LUAD.
引用
收藏
页数:18
相关论文
共 50 条
  • [21] Identification of endoplasmic reticulum stress-related genes as prognostic markers in colon cancer
    Xu, Wenjing
    Li, Wei
    Kuai, Dayu
    Li, Yaqiang
    Sun, Wei
    Liu, Xian
    Xu, Baohong
    CANCER BIOLOGY & THERAPY, 2025, 26 (01)
  • [22] Identification of an endoplasmic reticulum stress-related signature associated with clinical prognosis and immune therapy in glioma
    Li, Lianxin
    Yang, Zhihao
    Zheng, Yinfei
    Chen, Zhigang
    Yue, Xiaoyu
    Bian, Erbao
    Zhao, Bing
    BMC NEUROLOGY, 2022, 22 (01)
  • [23] Identification of critical endoplasmic reticulum stress-related genes in advanced atherosclerotic plaque
    Zhao, Ning
    Liu, Dan
    Song, Haixu
    Zhang, Xiaolin
    Yan, Chenghui
    Han, Yaling
    SCIENTIFIC REPORTS, 2025, 15 (01):
  • [24] Construction and validation of a prognostic signature based on seven endoplasmic reticulum stress-related lncRNAs for patients with head and neck squamous cell carcinoma
    Zhou, Mingzhu
    Li, Huihui
    Hu, Juanjuan
    Zhou, Tao
    Zhou, Liuqing
    Li, Yuncheng
    SCIENTIFIC REPORTS, 2023, 13 (01)
  • [25] Identification of an endoplasmic reticulum stress-related signature associated with clinical prognosis and immune therapy in glioma
    Lianxin Li
    Zhihao Yang
    Yinfei Zheng
    Zhigang Chen
    Xiaoyu Yue
    Erbao Bian
    Bing Zhao
    BMC Neurology, 22
  • [26] Development of a Combined Oxidative Stress and Endoplasmic Reticulum Stress-Related Prognostic Signature for Hepatocellular Carcinoma
    Ma, Hui
    Li, Zhongchen
    Chen, Rongxin
    Ren, Zhenggang
    COMBINATORIAL CHEMISTRY & HIGH THROUGHPUT SCREENING, 2024, 27 (19) : 2850 - 2860
  • [27] Identification of Tumor Microenvironment-Related Prognostic lncRNAs in Lung Adenocarcinoma
    Yuan, Ligong
    Li, Feng
    Wang, Shuaibo
    Yi, Hang
    Li, Fang
    Mao, Yousheng
    FRONTIERS IN ONCOLOGY, 2021, 11
  • [28] A Novel Defined Endoplasmic Reticulum Stress-Related lncRNA Signature for Prognosis Prediction and Immune Therapy in Glioma
    Zheng, Yinfei
    Yue, Xiaoyu
    Fang, Cheng
    Jia, Zhuang
    Chen, Yuxiang
    Xie, Han
    Zhao, Jiajia
    Yang, Zhihao
    Li, Lianxin
    Chen, Zhigang
    Bian, Erbao
    Zhao, Bing
    FRONTIERS IN ONCOLOGY, 2022, 12
  • [29] Development and validation of an endoplasmic reticulum stress-related molecular prognostic model for breast cancer
    Fan, Pengyu
    Wang, Jiajia
    Li, Ruolei
    Chang, Kexin
    Liu, Liuyin
    Wang, Yaping
    Wang, Zhe
    Zhang, Bo
    Ji, Cheng
    Zhang, Jian
    Chen, Suning
    Ling, Rui
    FRONTIERS IN ONCOLOGY, 2023, 13
  • [30] A novel endoplasmic reticulum stress-related lncRNA prognostic risk model for cutaneous melanoma
    Li, An-an
    Li, Fan
    Lan, Min
    Zhang, Yu
    Xie, Dong
    Yan, Mei-ying
    JOURNAL OF CANCER RESEARCH AND CLINICAL ONCOLOGY, 2022, 148 (12) : 3227 - 3241