Near-atomic resolution reconstructions from in situ revitrified cryo samples

被引:6
|
作者
Bongiovanni, Gabriele [1 ]
Harder, Oliver F. [1 ]
Voss, Jonathan M. [1 ]
Drabbels, Marcel [1 ]
Lorenz, Ulrich J. [1 ]
机构
[1] Ecole Polytechn Fed Lausanne EPFL, Lab Mol Nanodynam, CH-1015 Lausanne, Switzerland
基金
瑞士国家科学基金会; 欧洲研究理事会;
关键词
microsecond melting and revitrification; microsecond time-resolved cryo-EM; protein dynamics; time-resolvedelectron microscopy; preferential orientation; DYNAMICS; EM;
D O I
10.1107/S2059798323003431
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
A microsecond time-resolved version of cryo-electron microscopy (cryo-EM) has recently been introduced to enable observation of the fast conformational motions of proteins. The technique involves locally melting a cryo sample with a laser beam to allow the proteins to undergo dynamics in the liquid phase. When the laser is switched off, the sample cools within just a few microseconds and revitrifies, trapping particles in their transient configurations, in which they can subsequently be imaged. Two alternative implementations of the technique have previously been described, using either an optical microscope or performing revitrification experiments in situ. Here, it is shown that it is possible to obtain near-atomic resolution reconstructions from in situ revitrified cryo samples. Moreover, the resulting map is indistinguishable from that obtained from a conventional sample within the spatial resolution. Interestingly, it is observed that revitrification leads to a more homogeneous angular distribution of the particles, suggesting that revitrification may potentially be used to overcome issues of preferred particle orientation.
引用
收藏
页码:473 / 478
页数:6
相关论文
共 50 条
  • [31] Cryo-EM structure of the mitochondrial protein-import channel TOM complex at near-atomic resolution
    Tucker, Kyle
    Park, Eunyong
    NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2019, 26 (12) : 1158 - +
  • [32] Application of parallel continuous simulated tempering (PCST) to cryo-EM structural refinement at near-atomic resolution
    Ma, Jianpeng
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2018, 255
  • [33] Near-atomic resolution structures of interdigitated nucleosome fibres
    Adhireksan, Zenita
    Sharma, Deepti
    Lee, Phoi Leng
    Davey, Curt A.
    NATURE COMMUNICATIONS, 2020, 11 (01)
  • [34] Three-dimensional Reconstruction of Bovine Papillomavirus at Near-atomic Resolution by Single Particle Cryo Electron Microscopy
    Matthias, Wolf
    Grigorieff, Nikolaus
    Garcea, Robert L.
    Harrison, Stephen C.
    BIOPHYSICAL JOURNAL, 2009, 96 (03) : 413A - 413A
  • [35] Cryo-EM structure of the bacteriophage T4 portal protein assembly at near-atomic resolution
    Sun, Lei
    Zhang, Xinzheng
    Gao, Song
    Rao, Prashant A.
    Padilla-Sanchez, Victor
    Chen, Zhenguo
    Sun, Siyang
    Xiang, Ye
    Subramaniam, Sriram
    Rao, Venigalla B.
    Rossmann, Michael G.
    NATURE COMMUNICATIONS, 2015, 6
  • [36] Near-atomic cryo-EM structure of the helical measles virus nucleocapsid
    Gutsche, Irina
    Desfosses, Ambroise
    Effantin, Gregory
    Ling, Wai Li
    Haupt, Melina
    Ruigrok, Rob W. H.
    Sachse, Carsten
    Schoehn, Guy
    SCIENCE, 2015, 348 (6235) : 704 - 707
  • [37] Seeing a Contractile Bactericidal Nanomachine in Action at Near-Atomic Resolution
    Gong, Qin
    Liu, Jun
    BIOCHEMISTRY, 2020, 59 (24) : 2203 - 2204
  • [38] Near-atomic resolution visualization of human transcription promoter opening
    Yuan He
    Chunli Yan
    Jie Fang
    Carla Inouye
    Robert Tjian
    Ivaylo Ivanov
    Eva Nogales
    Nature, 2016, 533 : 359 - 365
  • [39] Near-atomic resolution structures of doublet microtubules from cilia and flagella.
    Ichikawa, M.
    Khalifa, A.
    Liu, D.
    Dai, D. C.
    Basu, K.
    Bui, K.
    MOLECULAR BIOLOGY OF THE CELL, 2018, 29 (26)
  • [40] Structural transitions of F-actin upon ATP hydrolysis at near-atomic resolution revealed by cryo-EM
    Felipe Merino
    Sabrina Pospich
    Johanna Funk
    Thorsten Wagner
    Florian Küllmer
    Hans-Dieter Arndt
    Peter Bieling
    Stefan Raunser
    Nature Structural & Molecular Biology, 2018, 25 : 528 - 537