Direct observation of cytoskeleton-dependent trafficking of miRNA visualized by the introduction of pre-miRNA

被引:4
作者
Ishikawa, Toshinari [1 ]
Sugawara, Ko [1 ]
Zhang, Junwei [1 ]
Funatsu, Takashi [1 ]
Okabe, Kohki [1 ,2 ]
机构
[1] Univ Tokyo, Grad Sch Pharmaceut Sci, 7-3-1 Hongo,Bunkyo Ku, Tokyo 1130033, Japan
[2] JST, PRESTO, 4-1-8 Honcho, Kawaguchi, Saitama 3320012, Japan
基金
日本科学技术振兴机构;
关键词
MESSENGER-RNAS; ENDOPLASMIC-RETICULUM; MICRORNA BIOGENESIS; TRANSLATION; PROTEIN; LOCALIZATION; TURNOVER;
D O I
10.1016/j.isci.2024.108811
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
MicroRNA (miRNA) plays physiologically and pathologically important roles in post -transcriptional regulation. Although miRNA has been suggested to dynamically interact with cellular organelles, the dynamicity of intracellular miRNA behavior has remained unclear. Here, by introducing fluorescently labeled pre-miRNA into living cells, we improved the miRNA visualization method using exogenous miRNA precursors. Through the combination of our miRNA visualization method and single -molecule sensitive fluorescence microscopy, we quantitatively analyzed the process of miRNA maturation. Furthermore, singleparticle tracking of fluorescent miRNA in cells revealed the directed movements of miRNA on cytoskeletal components (i.e., microtubules and actin filaments). Our results also suggest that cytoskeleton-dependent miRNA trafficking is associated with the interaction of miRNAs with the nucleus and the endoplasmic reticulum/Golgi apparatus. Our method should facilitate the elucidation of the mechanism and physiological significance of the subcellular localization and organelle interaction of miRNA.
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页数:15
相关论文
共 54 条
[1]   Direct evidence of nuclear Argonaute distribution during transcriptional silencing links the actin cytoskeleton to nuclear RNAi machinery in human cells [J].
Ahlenstiel, Chantelle L. ;
Lim, Heidi G. W. ;
Cooper, David A. ;
Ishida, Takaomi ;
Kelleher, Anthony D. ;
Suzuki, Kazuo .
NUCLEIC ACIDS RESEARCH, 2012, 40 (04) :1579-1595
[2]   Visualizing a protonated RNA state that modulates microRNA-21 maturation [J].
Baisden, Jared T. ;
Boyer, Joshua A. ;
Zhao, Bo ;
Hammond, Scott M. ;
Zhang, Qi .
NATURE CHEMICAL BIOLOGY, 2021, 17 (01) :80-88
[3]   mRNA Targeting to Endoplasmic Reticulum Precedes Ago Protein Interaction and MicroRNA (miRNA)-mediated Translation Repression in Mammalian Cells [J].
Barman, Bahnisikha ;
Bhattacharyya, Suvendra N. .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2015, 290 (41) :24650-24656
[4]   Metazoan MicroRNAs [J].
Bartel, David P. .
CELL, 2018, 173 (01) :20-51
[5]   MicroRNAs: Target Recognition and Regulatory Functions [J].
Bartel, David P. .
CELL, 2009, 136 (02) :215-233
[6]   Axonal precursor miRNAs hitchhike on endosomes and locally regulate the development of neural circuits [J].
Corradi, Eloina ;
Dalla Costa, Irene ;
Gavoci, Antoneta ;
Iyer, Archana ;
Roccuzzo, Michela ;
Otto, Tegan A. ;
Oliani, Eleonora ;
Bridi, Simone ;
Strohbuecker, Stephanie ;
Santos-Rodriguez, Gabriela ;
Valdembri, Donatella ;
Serini, Guido ;
Abreu-Goodger, Cei ;
Baudet, Marie-Laure .
EMBO JOURNAL, 2020, 39 (06)
[7]   Understanding mRNA trafficking: Are we there yet? [J].
Czaplinski, Kevin .
SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY, 2014, 32 :63-70
[8]  
Dave P., 2021, bioRxiv, DOI [10.1101/2021.06.07.447377, DOI 10.1101/2021.06.07.447377]
[9]   RNAi Factors Are Present and Active in Human Cell Nuclei [J].
Gagnon, Keith T. ;
Li, Liande ;
Chu, Yongjun ;
Janowski, Bethany A. ;
Corey, David R. .
CELL REPORTS, 2014, 6 (01) :211-221
[10]   Analysis of microRNA turnover in mammalian cells following Dicer1 ablation [J].
Gantier, Michael P. ;
McCoy, Claire E. ;
Rusinova, Irina ;
Saulep, Damien ;
Wang, Die ;
Xu, Dakang ;
Irving, Aaron T. ;
Behlke, Mark A. ;
Hertzog, Paul J. ;
Mackay, Fabienne ;
Williams, Bryan R. G. .
NUCLEIC ACIDS RESEARCH, 2011, 39 (13) :5692-5703