Group-Wise Cortical Parcellation Based on Structural Connectivity and Hierarchical Clustering

被引:1
|
作者
Molina, Joaquin [1 ]
Mendoza, Cristobal [1 ]
Roman, Claudio [4 ]
Houenou, Josselin [2 ]
Poupon, Cyril [2 ]
Mangin, Jean Francois [2 ]
El-Deredy, Wael [4 ]
Hernandez, Cecilia [1 ,3 ]
Guevara, Pamela [1 ]
机构
[1] Univ Concepcion, Fac Engn, Concepcion, Chile
[2] CEA, I2BM, NeuroSpin, Gif Sur Yvette, France
[3] Ctr Biotecnol & Bioengn CeBiB, Santiago, Chile
[4] Univ Valparaiso, Valparaiso, Chile
关键词
cortical parcellation; connectivity-based parcellation; connectome; dMRI; clustering; TRACTOGRAPHY; ATLAS;
D O I
10.1117/12.2670138
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
This paper presents a new cortical parcellation method based on group-wise connectivity and hierarchical clustering. A preliminary sub-parcellation is performed using intra-subject and inter-subject fiber clustering to obtain representative bundles among subjects with similar shapes and trajectories. The sub-parcellation is obtained by intersecting fiber clusters with cortical meshes. Next, mean connectivity and mean overlap matrices are computed over the sub-parcels to obtain spatial and connectivity information. To hierarchize the information, we propose to weight both matrices, to obtain an affinity graph, and then a dendrogram to merge or divide parcels by their hierarchy. Finally, to obtain homogeneous parcels, the method computes morphological operations. By selecting a different number of clusters over the dendrogram, the method obtains a different number of parcels and a variation in the resulting parcel sizes, depending on the parameters used. We computed the coefficient of variation (CV) of the parcel size to evaluate the homogeneity of the parcels. Preliminary results suggest that the use of representative clusters and the integration of sub-parcel overlap and connectivity strength provide useful information to generate cortical parcellations at different levels of granularity. Even results are preliminary, this novel method allows researchers to add group-wise connectivity strength and spatial information for the construction of diffusion-based parcellations. Future work will include a detailed analysis of parameters, such as the matrix weights and the number of sub-parcel clusters, and the generation of hierarchical parcellations to improve the insight into the cortex subdivision and hierarchy among parcels.
引用
收藏
页数:10
相关论文
共 50 条
  • [41] List-Based Group-Wise Symbol Detection for Multiple Signal Communications
    Krause, Michael
    Taylor, Desmond P.
    Martin, Philippa A.
    IEEE TRANSACTIONS ON WIRELESS COMMUNICATIONS, 2011, 10 (05) : 1636 - 1644
  • [42] Group-wise Feature Orthogonalization and Suppression for GAN based Facial Attribute Translation
    Wen, Zhiwei
    Wu, Haoqian
    Xie, Weicheng
    Shen, Linlin
    2020 25TH INTERNATIONAL CONFERENCE ON PATTERN RECOGNITION (ICPR), 2021, : 3767 - 3774
  • [43] Measuring gene functional similarity based on group-wise comparison of GO terms
    Teng, Zhixia
    Guo, Maozu
    Liu, Xiaoyan
    Dai, Qiguo
    Wang, Chunyu
    Xuan, Ping
    BIOINFORMATICS, 2013, 29 (11) : 1424 - 1432
  • [44] Validation of Group-wise Registration for Surface-based Functional MRI Analysis
    Yu, Chang
    Liu, Yue
    Cai, Leon Y.
    Kerley, Cailey, I
    Xu, Kaiwen
    Taylor, Warren D.
    Kang, Hakmook
    Shafer, Andrea T.
    Beason-Held, Lori L.
    Resnick, Susan M.
    Landman, Bennett A.
    Lyu, Ilwoo
    MEDICAL IMAGING 2021: IMAGE PROCESSING, 2021, 11596
  • [45] Group-wise Feature-based Registration of CT and Ultrasound Images of Spine
    Rasoulian, Abtin
    Mousavi, Parvin
    Moghari, Mehdi Hedjazi
    Foroughi, Pezhman
    Abolmaesumi, Purang
    MEDICAL IMAGING 2010: VISUALIZATION, IMAGE-GUIDED PROCEDURES, AND MODELING, 2010, 7625
  • [46] A systematic comparison of structural-, structural connectivity-, and functional connectivity-based thalamus parcellation techniques
    Iglehart, Charles
    Monti, Martin
    Cain, Joshua
    Tourdias, Thomas
    Saranathan, Manojkumar
    BRAIN STRUCTURE & FUNCTION, 2020, 225 (05): : 1631 - 1642
  • [47] Individual Functional ROI Optimization Via Maximization of Group-Wise Consistency of Structural and Functional Profiles
    Li, Kaiming
    Guo, Lei
    Zhu, Dajiang
    Hu, Xintao
    Han, Junwei
    Liu, Tianming
    NEUROINFORMATICS, 2012, 10 (03) : 225 - 242
  • [48] Individual Functional ROI Optimization Via Maximization of Group-Wise Consistency of Structural and Functional Profiles
    Kaiming Li
    Lei Guo
    Dajiang Zhu
    Xintao Hu
    Junwei Han
    Tianming Liu
    Neuroinformatics, 2012, 10 : 225 - 242
  • [49] Unbiased Group-Wise Image Registration: Applications in Brain Fiber Tract Atlas Construction and Functional Connectivity Analysis
    Xiujuan Geng
    Hong Gu
    Wanyong Shin
    Thomas J. Ross
    Yihong Yang
    Journal of Medical Systems, 2011, 35 : 921 - 928
  • [50] Unbiased Group-Wise Image Registration: Applications in Brain Fiber Tract Atlas Construction and Functional Connectivity Analysis
    Geng, Xiujuan
    Gu, Hong
    Shin, Wanyong
    Ross, Thomas J.
    Yang, Yihong
    JOURNAL OF MEDICAL SYSTEMS, 2011, 35 (05) : 921 - 928