Multi-omics in Crohn's disease: New insights from inside

被引:8
作者
Mu, Chenlu [1 ]
Zhao, Qianjing [1 ]
Zhao, Qing [1 ]
Yang, Lijiao [1 ]
Pang, Xiaoqi [1 ]
Liu, Tianyu [1 ]
Li, Xiaomeng [2 ]
Wang, Bangmao [1 ]
Fung, Shan-Yu [3 ]
Cao, Hailong [4 ]
机构
[1] Tianjin Med Univ, Gen Hosp, Tianjin Inst Digest Dis, Dept Gastroenterol & Hepatol,Tianjin Key Lab Dige, Tianjin, Peoples R China
[2] Tianjin Med Univ, Sch Basic Med Sci, Prov & Minist Cosponsored Collaborat Innovat Ctr, Dept Immunol,Minist Educ,Key Lab Immune Microenvi, Tianjin, Peoples R China
[3] Tianjin Med Univ, Sch Basic Med Sci, Prov & Minist Cosponsored Collaborat Innovat Ctr, Dept Immunol,Minist Educ,Key Lab Immune Microenvi, 22 Qixiangtai Rd, Tianjin 300070, Peoples R China
[4] Tianjin Med Univ, Gen Hosp, Tianjin Inst Digest Dis, Dept Gastroenterol & Hepatol,Tianjin Key Lab Dige, 154 Anshan Rd, Tianjin 300052, Peoples R China
基金
中国国家自然科学基金;
关键词
Crohn's disease; Multi-omics; Gut microbiota; Metagenomics; Metabolomics; Proteomics; INFLAMMATORY-BOWEL-DISEASE; GENOME-WIDE ASSOCIATION; SUSCEPTIBILITY LOCI; BILE-ACIDS; SHOTGUN METAGENOMICS; PEDIATRIC-PATIENTS; GUT MICROBIOTA; TWIN COHORT; RISK; BIOMARKERS;
D O I
10.1016/j.csbj.2023.05.010
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Crohn's disease (CD) is an inflammatory bowel disease (IBD) with complex clinical manifestations such as chronic diarrhea, weight loss and hematochezia. Despite the increasing incidence worldwide, cure of CD remains extremely difficult. The rapid development of high-throughput sequencing technology with in-tegrated-omics analyses in recent years has provided a new means for exploring the pathogenesis, mining the biomarkers and designing targeted personalized therapeutics of CD. Host genomics and epigenomics unveil heredity-related mechanisms of susceptible individuals, while microbiome and metabolomics map host-microbe interactions in CD patients. Proteomics shows great potential in searching for promising biomarkers. Nonetheless, single omics technology cannot holistically connect the mechanisms with het-erogeneity of pathological behavior in CD. The rise of multi-omics analysis integrates genetic/epigenetic profiles with protein/microbial metabolite functionality, providing new hope for comprehensive and in-depth exploration of CD. Herein, we emphasized the different omics features and applications of CD and discussed the current research and limitations of multi-omics in CD. This review will update and deepen our understanding of CD from integration of broad omics spectra and will provide new evidence for tar-geted individualized therapeutics. (c) 2023 The Authors. Published by Elsevier B.V. on behalf of Research Network of Computational and Structural Biotechnology. This is an open access article under the CC BY-NC-ND license (http://creative-commons.org/licenses/by-nc-nd/4.0/).
引用
收藏
页码:3054 / 3072
页数:19
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