Stemness genes and miR-1247-3p expression associate with clinicopathological parameters and prognosis in lung adenocarcinoma

被引:0
|
作者
Limbu, Shiwani [1 ]
Mccloskey, Kara E. [1 ,2 ]
机构
[1] Univ Calif Merced, Quantitat & Syst Biol Program, Merced, CA 95343 USA
[2] Univ Calif Merced, Mat Sci & Engn Dept, Merced, CA 95343 USA
来源
PLOS ONE | 2023年 / 18卷 / 11期
关键词
PAN-CANCER ANALYSIS; SUPPRESSOR-CELLS; BREAST-CANCER; INFILTRATING IMMUNE; TUMOR-SUPPRESSOR; NETWORK ANALYSIS; DRUG-RESISTANCE; INDEX; METASTASIS; SIGNATURE;
D O I
10.1371/journal.pone.0294171
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Lung cancer makes up one-fourth of all cancer-related mortality with the highest mortality rate among all cancers. Despite recent scientific advancements in cancer therapeutics, the 5-year survival rate of lung adenocarcinoma (LUAD) cancer patients remains below 15 percent. It has been suggested that the high mortality rate of LUAD is linked to the acquisition of progenitor-like cells with stem-like characteristics that assist the whole tumor in regulating immune cell infiltration. To examine this hypothesis further, this study mined several databases to explore the presence of stemness-related genes and miRNAs in LUAD cancers. We examine their association with immune and accessory cell infiltration rates and patient survival. We found 3 stem cell-related genes, ORC1L, KIF20A, and DLGAP5, present in LUAD that also correlate with changes in immune infiltration rates and reduced patient survival rates. Additionally, the modulation in myeloid-derived suppressor cell (MDSC) infiltration and miRNA hsa-mir-1247-3p mediated targeting of tumor suppressor SLC24A4 and oncogenes RAB3B and HJURP appears to primarily regulate LUAD patient survival. Given these findings, hsa-mir-1247-3p and/or its associated gene targets may offer a promising avenue to enhance patient survivability.
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页数:15
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