Prediction of skin sensitization using machine learning

被引:1
作者
Im, Jueng Eun [1 ,2 ,4 ]
Lee, Jung Dae [1 ,2 ]
Kim, Hyang Yeon [1 ,2 ]
Kim, Hak Rim [2 ,3 ]
Seo, Dong-Wan [1 ,2 ]
Kim, Kyu-Bong [1 ,2 ]
机构
[1] Dankook Univ, Coll Pharm, Dept Pharm, 119 Dandae Ro, Cheonan 31116, Chungnam, South Korea
[2] Dankook Univ, Ctr Human Risk Assessment, Cheonan 31116, Chungnam, South Korea
[3] Dankook Univ, Coll Med, Dept Pharmacol, Cheonan 31116, Chungnam, South Korea
[4] Minist Food & Drug Safety, Dept Biopharmaceut & Herbal Med Evaluat, Natl Inst Food & Drug Safety Evaluat, Div Cosmet Evaluat, Cheongju 28159, South Korea
关键词
Skin sensitization; Machine learning; Random forest; Surface tension; LYMPH-NODE ASSAY; LINE ACTIVATION TEST; PEPTIDE REACTIVITY; RISK-ASSESSMENT; POTENCY; HAZARD; MODEL; DRUG; LLNA;
D O I
10.1016/j.tiv.2023.105690
中图分类号
R99 [毒物学(毒理学)];
学科分类号
100405 ;
摘要
As global awareness of animal welfare spreads, the development of alternative animal test models is increasingly necessary. The purpose of this study was to develop a practical machine-learning model for skin sensitization using three physicochemical properties of the chemicals: surface tension, melting point, and molecular weight. In this study, a total of 482 chemicals with local lymph node assay results were collected, and 297 datasets with 6 physico-chemical properties were used to develop Random Forest (RF) model for skin sensitization. The developed model was validated with 45 fragrance allergens announced by European Commission. The validation results showed that RF achieved better or similar classification performance with f1-scores of 54% for penal, 82% for ternary, and 96% for binary compared with Support Vector Machine (SVM) (penal, 41%; ternary, 81%; bi-nary, 93%), QSARs (ChemTunes, 72% for ternary; OECD Toolbox, 89% for binary), and a linear model (Kim et al., 2020) (41% for penal), and we recommend the ternary classification based on Global Harmonized System providing more detailed and precise information. In the further study, the proposed model results were exper-imentally validated with the Direct Peptide Reactivity Assay (DPRA, OECD TG 442C approved model), and the results showed a similar tendency. We anticipate that this study will help to easily and quickly screen chemical sensitization hazards.
引用
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页数:20
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