'Synthesis, antiviral activity, molecular docking, and molecular dynamics studies of ethoxy phthalimide pyrazole derivatives against Cytomegalovirus and Varicella-Zoster virus: potential consequences and strategies for developing new antiviral treatments'

被引:1
作者
Verma, Abhishek Kumar [1 ]
Yadav, Vipin [2 ]
Bhojiya, Ali Asger [3 ]
Upadhyay, Sudhir K. [4 ]
Singh, Nripendra [5 ]
Pareek, Shruti Shree [6 ]
Ashid, Mohammad [7 ]
Ahmed, Sk. Faisal [8 ,9 ]
Hossain, Md. Shahadat [8 ,9 ]
机构
[1] Mewar Univ, Fac Sci & Technol, Dept Life Sci, Chittaurgarh, Rajasthan, India
[2] Univ Rajasthan, ECH Incubat Ctr, Jaipur, India
[3] US Ostwal PG Coll, Dept Bot, Chittaurgarh, India
[4] VBS Purvanchal Univ, Dept Environm Sci, Jaunpur, India
[5] VBS Purvanchal Univ, Inst Pharm, Jaunpur 222003, UP, India
[6] Univ Rajasthan, Dept Bot, Jaipur, Rajasthan, India
[7] Mewar Univ, Fac Sci & Technol, Dept Chem, Chittaurgarh, India
[8] Noakhali Sci & Technol Univ, Dept Biotechnol & Genet Engn, Noakhali, Bangladesh
[9] Noakhali Sci & Technol Univ, Computat Biol & Chem Lab CBC, Noakhali, Bangladesh
关键词
Synthesis; in vitro activity; computational biology; cytomegalovirus; Varicella-Zoster virus; molecular docking; ethoxy phthalimide pyrazole derivatives; FREE-ENERGY CALCULATIONS; ANTI-DIABETIC ACTIVITY; THYMIDINE KINASE; SULFONYLUREA DERIVATIVES; THYMIDYLATE KINASE; IDENTIFICATION; MECHANISM; DAXX;
D O I
10.1080/07391102.2023.2279278
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Substituted ethoxy phthalimide pyrazole derivatives (6a-e) have been produced using a one-pot synthesis technique. Spectral analysis was used to establish the molecular structure of the synthesized compounds, and they were examined in silico and in vitro for their ability to bind to and inhibit replication of the AD-169 strain, the Davis strain of CMV, the OKA strain and the 07/1 strain of Varicella-Zoster virus (VZV). Molecular Docking was used to estimate the binding mechanism and energy of compounds 4, 6a-e to their respective target proteins, thymidine kinase (TK), Varicella-Zoster protease (VZP) of VZV and tegument protein pp71 (TPpp71) of Cytomegalovirus (CMV). The MIC50 and EC50 were utilized to evaluate the antiviral and cytotoxic activities of test compounds in human embryonic lung (HEL) cells against the two reference medicines, Ganciclovir and Acyclovir. The chemicals studied showed a high affinity for binding sites and near binding sites of target proteins by generating H-bonds, carbon-hydrogen bonds, pi-anion, pi-sulfur, pi-sigma, alkyl and pi-alkyl interactions. All of the test compounds (6a-e) had higher binding energy than the standard medications. The ADME/T data suggests that these potential inhibitors are less toxic. Drug-protein complexes are structurally compact and demonstrate minimal conformational change in molecular dynamics (MDs) simulations, indicating stability and stiffness. MM-PBSA and post-simulation analysis can predict lead compound active cavity binding stability. By inhibiting multitargeted proteins, these synthetic compounds may improve antiviral therapy. Our research suggests that these unique synthesized chemicals may be useful and accessible adjuvant antiviral therapy for Varicella Zoster and CMV.
引用
收藏
页码:13903 / 13922
页数:20
相关论文
共 78 条
[1]   Immune evasion as a pathogenic mechanism of varicella zoster virus [J].
Abendroth, A ;
Arvin, AM .
SEMINARS IN IMMUNOLOGY, 2001, 13 (01) :27-39
[2]  
Agrawal NN, 2005, INDIAN J CHEM B, V44, P2601
[3]   Binding mode analysis, dynamic simulation and binding free energy calculations of the MurF ligase from Acinetobacter baumannii [J].
Ahmad, Sajjad ;
Raza, Saad ;
Uddin, Reaz ;
Azam, Syed Sikander .
JOURNAL OF MOLECULAR GRAPHICS & MODELLING, 2017, 77 :72-85
[4]   Identification and Evaluation of Inhibitors of Lipase from Malassezia restricta using Virtual High-Throughput Screening and Molecular Dynamics Studies [J].
Ali, Shahid ;
Khan, Faez Iqbal ;
Mohammad, Taj ;
Lan, Dongming ;
Hassan, Md. Imtaiyaz ;
Wang, Yonghua .
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2019, 20 (04)
[5]   Human cytomegalovirus tegument protein pp71 (ppUL82) enhances the infectivity of viral DNA and accelerates the infectious cycle [J].
Baldick, CJ ;
Marchini, A ;
Patterson, CE ;
Shenk, T .
JOURNAL OF VIROLOGY, 1997, 71 (06) :4400-4408
[6]  
BRETZEL RG, 1993, AM J KIDNEY DIS, V21, P53
[7]   Human cytomegalovirus clinical isolates carry at least 19 genes not found in laboratory strains [J].
Cha, TA ;
Tom, E ;
Kemble, GW ;
Duke, GM ;
Mocarski, ES ;
Spaete, RR .
JOURNAL OF VIROLOGY, 1996, 70 (01) :78-83
[8]  
Chen M. S., 1979, KINETIC STUDIES HERP
[9]  
CHEN MS, 1979, J BIOL CHEM, V254, P747
[10]  
CHEN MS, 1978, J BIOL CHEM, V253, P1325