Cuproptosis-Related Ferroptosis genes for Predicting Prognosis in kidney renal clear cell carcinoma

被引:11
作者
Luo, Gang [1 ]
Wang, Lini [1 ]
Zheng, Ziyu [1 ]
Gao, Baobao [1 ]
Lei, Chong [1 ]
机构
[1] Fourth Mil Med Univ, Xijing Hosp, Dept Anesthesiol & Perioperat Med, Xian 710032, Peoples R China
基金
国家重点研发计划; 中国国家自然科学基金;
关键词
Signature; Clear Cell Renal Cell Carcinoma; Cuproptosis; Ferroptosis; CANCER-CELLS; SERUM-LEVELS; TRACE-ELEMENTS; COPPER; IRON; METABOLISM; SIGNATURE; DEATH; INHIBITION; APOPTOSIS;
D O I
10.1186/s40001-023-01137-z
中图分类号
R-3 [医学研究方法]; R3 [基础医学];
学科分类号
1001 ;
摘要
Kidney renal clear cell carcinoma (KIRC) is a main subtype of kidney cancers. Cuproptosis and ferroptosis are correlated with immune infiltration and prognosis in tumors. However, the role of Cuproptosis-related Ferroptosis genes (CRFGs) in KIRC has rarely been fully understood. Therefore, we constructed a prognostic signature based on different expression of CRFGs in KIRC. All raw data of this study were extracted from public TCGA datasets. Cuproptosis and Ferroptosis genes were collected from the previous research. Finally, a total of 36 significantly different CRFGs were identified from TCGA-KIRC cohort. Six-gene signature (TRIB3, SLC2A3, PML, CD44, CDKN2A and MIOX) was identified by LASSO Cox regression based on the significantly different CRFGs. The CRFGs signature was correlated with worse overall survival and the AUC was 0.750. Functional enrichment indicated that CRFGs were mainly enriched in metabolism, drug resistance, tumor immunity pathways. Besides, the IC50 and immune checkpoint differentially expressed between different groups. The proposed 6-CRFGs signature is a promising biomarker to predict clinical outcomes and therapeutic responses for KIRC patient.
引用
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页数:11
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共 56 条
[1]   Changes in the Serum Levels of Trace Elements Before and After the Operation in Thyroid Cancer Patients [J].
Baltaci, Abdulkerim Kasim ;
Dundar, Tugrul Kadir ;
Aksoy, Faruk ;
Mogulkoc, Rasim .
BIOLOGICAL TRACE ELEMENT RESEARCH, 2017, 175 (01) :57-64
[2]   Identification of a novel cuproptosis-related gene signature and integrative analyses in patients with lower-grade gliomas [J].
Bao, Jia-hao ;
Lu, Wei-cheng ;
Duan, Hao ;
Ye, Ya-qi ;
Li, Jiang-bo ;
Liao, Wen-ting ;
Li, Yong-chun ;
Sun, Yang-peng .
FRONTIERS IN IMMUNOLOGY, 2022, 13
[3]   Heavy and Trace Metals in Carcinoma of the Gallbladder [J].
Basu, Somprakas ;
Singh, Manish K. ;
Singh, Tej B. ;
Bhartiya, Satyanam K. ;
Singh, Sureshwar P. ;
Shukla, Vijay K. .
WORLD JOURNAL OF SURGERY, 2013, 37 (11) :2641-2646
[4]   Tumor and immune reprogramming during immunotherapy in advanced renal cell carcinoma [J].
Bi, Kevin ;
He, Meng Xiao ;
Bakouny, Ziad ;
Kanodia, Abhay ;
Napolitano, Sara ;
Wu, Jingyi ;
Grimaldi, Grace ;
Braun, David A. ;
Cuoco, Michael S. ;
Mayorga, Angie ;
DelloStritto, Laura ;
Bouchard, Gabrielle ;
Steinharter, John ;
Tewari, Alok K. ;
Vokes, Natalie, I ;
Shannon, Erin ;
Sun, Maxine ;
Park, Jihye ;
Chang, Steven L. ;
McGregor, Bradley A. ;
Haq, Rizwan ;
Denize, Thomas ;
Signoretti, Sabina ;
Guerriero, Jennifer L. ;
Vigneau, Sebastien ;
Rozenblatt-Rosen, Orit ;
Rotem, Asaf ;
Regev, Aviv ;
Choueiri, Toni K. ;
Van Allen, Eliezer M. .
CANCER CELL, 2021, 39 (05) :649-+
[5]   A Novel Cuproptosis-Related Prognostic Gene Signature and Validation of Differential Expression in Clear Cell Renal Cell Carcinoma [J].
Bian, Zilong ;
Fan, Rong ;
Xie, Lingmin .
GENES, 2022, 13 (05)
[6]   Copper control as an antiangiogenic anticancer therapy: Lessons from treating Wilson's disease [J].
Brewer, GJ .
EXPERIMENTAL BIOLOGY AND MEDICINE, 2001, 226 (07) :665-673
[7]   Immunogenic Cell Death and Role of Nanomaterials Serving as Therapeutic Vaccine for Personalized Cancer Immunotherapy [J].
Catanzaro, Elena ;
Feron, Olivier ;
Skirtach, Andre G. ;
Krysko, Dmitri V. .
FRONTIERS IN IMMUNOLOGY, 2022, 13
[8]   Combinative treatment of β-elemene and cetuximab is sensitive to KRAS mutant colorectal cancer cells by inducing ferroptosis and inhibiting epithelial-mesenchymal transformation [J].
Chen, Peng ;
Li, Xuejie ;
Zhang, Ruonan ;
Liu, Shuiping ;
Xiang, Yu ;
Zhang, Mingming ;
Chen, Xiaying ;
Pan, Ting ;
Yan, Lili ;
Feng, Jiao ;
Duan, Ting ;
Wang, Da ;
Chen, Bi ;
Jin, Ting ;
Wang, Wengang ;
Chen, Liuxi ;
Huang, Xingxing ;
Zhang, Wenzheng ;
Sun, Yitian ;
Li, Guohua ;
Kong, Lingpan ;
Chen, Xiaohui ;
Li, Yongqiang ;
Yang, Zuyi ;
Zhang, Qin ;
Zhuo, Lvjia ;
Sui, Xinbing ;
Xie, Tian .
THERANOSTICS, 2020, 10 (11) :5107-5119
[9]   Analysis of serum levels of 15 trace elements in breast cancer patients in Shandong, China [J].
Ding, Xiao ;
Jiang, Meng ;
Jing, Haiyan ;
Sheng, Wei ;
Wang, Xingwen ;
Han, Junqing ;
Wang, Luhua .
ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH, 2015, 22 (10) :7930-7935
[10]   Intersection of Iron and Copper Metabolism in the Mammalian Intestine and Liver [J].
Doguer, Caglar ;
Ha, Jung-Heun ;
Collins, James F. .
COMPREHENSIVE PHYSIOLOGY, 2018, 8 (04) :1433-1461