GSDMB: A novel, independent prognostic marker and potential new therapeutic target in clear cell renal cell carcinoma

被引:2
作者
Huang, Hongshuang [1 ]
Chen, Ru [2 ]
Deng, Xinxi [3 ]
Wang, Jie [4 ,5 ,7 ,8 ]
Chen, Jianhui [6 ,9 ]
机构
[1] Putian Univ, Dept Urol, Affiliated Hosp, Putian 351100, Fujian, Peoples R China
[2] Nanchang Univ, Affiliated Hosp 1, Dept Urol, Nanchang 330000, Jiangxi, Peoples R China
[3] Jiujiang No 1 Peoples Hosp, Dept Urol, Jiujiang 332000, Jiangxi, Peoples R China
[4] Clin Med Coll, Dept Ultrasound, Chengdu 610500, Sichuan, Peoples R China
[5] Chengdu Med Coll, Affiliated Hosp 1, Chengdu 610500, Sichuan, Peoples R China
[6] Fujian Med Univ, Union Hosp, Dept Oncol, Fuzhou 350000, Fujian, Peoples R China
[7] Clin Med Coll, Dept Ultrasound, 278 Baoguang Ave, Chengdu 610500, Sichuan, Peoples R China
[8] Chengdu Med Coll, Affiliated Hosp 1, 278 Baoguang Ave, Chengdu 610500, Sichuan, Peoples R China
[9] Fujian Med Univ, Union Hosp, Dept Urol, 29 Xinquan Rd, Fuzhou 350000, Fujian, Peoples R China
关键词
clear cell renal carcinoma; gasdermin B; prognosis; UALCAN; Gene Expression Profiling Interactive Analysis; DRUGS INDUCE PYROPTOSIS; GENE-EXPRESSION; CANCER PROLIFERATION; GASTRIC-CANCER; WEB SERVER; GASDERMIN; RESOURCE; FAMILY; IDENTIFICATION; CLEAVAGE;
D O I
10.3892/ol.2024.14219
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Gasdermin (GSDM) family members are involved in numerous biological processes, including pyroptosis, as well as in the initiation and progression of various types of cancer. However, the specific role of GSDM genes in clear cell renal cell carcinoma (ccRCC) has yet to be fully clarified. The present study investigated the differential expression and genetic alterations GSDM genes, their effects on prognosis and immune modulation, and their functional enrichment in ccRCC. Several bioinformatics databases were used, including UALCAN, The Cancer Genome Atlas, Gene Expression Profiling Interactive Analysis, Metascape, Tumor Immune Estimation Resource, GSCALite and cBioPortal. The results revealed that the expression levels of GSDMA, GSDMB, GSDMC and GSDMD were significantly upregulated in cancer tissues compared with those in paracancerous tissues in patients with ccRCC, whereas the expression of DFNB59 exhibited the opposite trend. The results were experimentally validated in patients with ccRCC, and it was confirmed that the expression levels of GSDMA, GSDMB, GSDMC, GSDMD and GSDME (DFNA5) were significantly enhanced, whereas (PJVK, DFNB59) expression was reduced. In addition, elevated GSDMB, GSDMD and DFNA5 expression levels were clearly associated with worse pathological characteristics of ccRCC, including a high pathological stage and high tumor grade. Furthermore, the high expression levels of GSDMB, GSDMC, GSDMD, DFNA5 and PJVK were shown to be associated with worse overall survival (OS) and progression-free interval in patients with ccRCC. Both univariate and multivariate analyses indicated that the expression of GSDMB was independently associated with the OS of patients with ccRCC. Additionally, a high mutation rate of GSDM genes (33%) was observed in patients with ccRCC, and GSDM gene mutations were also significantly associated with a poor OS in patients with ccRCC. Significant associations between GSDM genes and ccRCC immunoprofiling and drug sensitivity were also determined. In conclusion, the findings of the present study indicated that GSDMB, GSDMD and DFNA5 may be considered promising therapeutic agents and potential biomarkers for patients with ccRCC. Furthermore, GSDMB could act as an independent predictor for the OS of patients with ccRCC.
引用
收藏
页数:17
相关论文
共 53 条
[1]   Identification of DFNA5 as a target of epigenetic inactivation in gastric cancer [J].
Akino, Kimishige ;
Toyota, Minoru ;
Suzuki, Hiromu ;
Imai, Takashi ;
Maruyama, Reo ;
Kusano, Masanobu ;
Nishikawa, Noriko ;
Watanabe, Yoshiyuki ;
Sasaki, Yasushi ;
Abe, Tamaki ;
Yamamoto, Eiichiro ;
Tarasawa, Isao ;
Sonoda, Tomoko ;
Mori, Mitsuru ;
Imai, Kohzoh ;
Shinomura, Yasuhisa ;
Tokino, Takashi .
CANCER SCIENCE, 2007, 98 (01) :88-95
[2]   An Interactive Resource to Identify Cancer Genetic and Lineage Dependencies Targeted by Small Molecules [J].
Basu, Amrita ;
Bodycombe, Nicole E. ;
Cheah, Jaime H. ;
Price, Edmund V. ;
Liu, Ke ;
Schaefer, Giannina I. ;
Ebright, Richard Y. ;
Stewart, Michelle L. ;
Ito, Daisuke ;
Wang, Stephanie ;
Bracha, Abigail L. ;
Liefeld, Ted ;
Wawer, Mathias ;
Gilbert, Joshua C. ;
Wilson, Andrew J. ;
Stransky, Nicolas ;
Kryukov, Gregory V. ;
Dancik, Vlado ;
Barretina, Jordi ;
Garraway, Levi A. ;
Hon, C. Suk-Yee ;
Munoz, Benito ;
Bittker, Joshua A. ;
Stockwell, Brent R. ;
Khabele, Dineo ;
Stern, Andrew M. ;
Clemons, Paul A. ;
Shamji, Alykhan F. ;
Schreiber, Stuart L. .
CELL, 2013, 154 (05) :1151-1161
[3]  
Bellido JA., 2007, ARCH ESP UROL, V60, p1.079
[4]   Molecular stratification of clear cell renal cell carcinoma by consensus clustering reveals distinct subtypes and survival patterns [J].
Brannon, A. Rose ;
Reddy, Anupama ;
Seiler, Michael ;
Arreola, Alexandra ;
Chen, Shufen ;
Moore, Dominic T. ;
Pruthi, Raj S. ;
Wallen, Eric M. ;
Nielsen, Matthew E. ;
Liu, Huiqing ;
Ljungberg, Borje ;
Zhao, Hongjuan ;
Brooks, James D. ;
Ganesan, Shridar ;
Bhanot, Gyan ;
Rathmell, W. Kimryn .
CANCER RESEARCH, 2010, 70
[5]   The gasdermins, a protein family executing cell death and inflammation [J].
Broz, Petr ;
Pelegrin, Pablo ;
Shao, Feng .
NATURE REVIEWS IMMUNOLOGY, 2020, 20 (03) :143-157
[6]   Epidemiology of Renal Cell Carcinoma [J].
Capitanio, Umberto ;
Bensalah, Karim ;
Bex, Axel ;
Boorjian, Stephen A. ;
Bray, Freddie ;
Coleman, Jonathan ;
Gore, John L. ;
Sun, Maxine ;
Wood, Christopher ;
Russo, Paul .
EUROPEAN UROLOGY, 2019, 75 (01) :74-84
[7]   UALCAN: A Portal for Facilitating Tumor Subgroup Gene Expression and Survival Analyses [J].
Chandrashekar, Darshan S. ;
Bashel, Bhuwan ;
Balasubramanya, Sai Akshaya Hodigere ;
Creighton, Chad J. ;
Ponce-Rodriguez, Israel ;
Chakravarthi, Balabhadrapatruni V. S. K. ;
Varambally, Sooryanarayana .
NEOPLASIA, 2017, 19 (08) :649-658
[8]   Identification of the Expression and Clinical Significance of E2F Family in Clear Cell Renal Cell Carcinoma [J].
Chen, Ru ;
Zhang, Zhicheng ;
Hu, Bing ;
Jiang, Ming ;
Zheng, Ping ;
Deng, Wen ;
Fu, Bin ;
Sun, Ting .
INTERNATIONAL JOURNAL OF GENERAL MEDICINE, 2022, 15 :1193-1212
[9]   An Immune Atlas of Clear Cell Renal Cell Carcinoma [J].
Chevrier, Stephane ;
Levine, Jacob Harrison ;
Zanotelli, Vito Riccardo Tomaso ;
Silina, Karina ;
Schulz, Daniel ;
Bacac, Marina ;
Ries, Carola Hermine ;
Ailles, Laurie ;
Jewett, Michael Alexander Spencer ;
Moch, Holger ;
van den Broek, Maries ;
Beisel, Christian ;
Stadler, Michael Beda ;
Gedye, Craig ;
Reis, Bernhard ;
Pe'er, Dana ;
Bodenmiller, Bernd .
CELL, 2017, 169 (04) :736-749
[10]   Papillary renal cell carcinoma: A review of the current therapeutic landscape [J].
Courthod, Giulia ;
Tucci, Marcello ;
Di Maio, Massimo ;
Scagliotti, Giorgio V. .
CRITICAL REVIEWS IN ONCOLOGY HEMATOLOGY, 2015, 96 (01) :100-112