optogenetics;
phytochrome;
defecation motor program;
Caenorhabditis elegans;
MOTOR PROGRAM;
DOMAIN;
PHYCOCYANOBILIN;
ACTIVATION;
COORDINATE;
DYNAMICS;
GENETICS;
BINDING;
SYSTEM;
D O I:
10.1021/acssynbio.2c00461
中图分类号:
Q5 [生物化学];
学科分类号:
071010 ;
081704 ;
摘要:
Optogenetic techniques have been intensively applied to the nematode Caenorhabditis elegans to investigate its neural functions. However, as most of these optogenetics are responsive to blue light and the animal exhibits avoidance behavior to blue light, the application of optogenetic tools responsive to longer wavelength light has been eagerly anticipated. In this study, we report the implementation in C. elegans of a phytochrome-based optogenetic tool that responds to red/near-infrared light and manipulates cell signaling. We first introduced the SynPCB system, which enabled us to synthesize phycocyanobilin (PCB), a chromophore for phytochrome, and confirmed the biosynthesis of PCB in neurons, muscles, and intestinal cells. We further confirmed that the amount of PCBs synthesized by the SynPCB system was sufficient for photoswitching of phytochrome B (PhyB)-phytochrome interacting factor 3 (PIF3). In addition, optogenetic elevation of intracellular Ca2+ levels in intestinal cells induced a defecation motor program. These SynPCB system and phytochrome-based optogenetic techniques would be of great value in elucidating the molecular mechanisms underlying C. elegans behaviors.
机构:
Kyoto Univ, Grad Sch Med, Sakyo Ku, Kyoto 6068501, JapanKyoto Univ, Grad Sch Med, Sakyo Ku, Kyoto 6068501, Japan
Aoki, Kazuhiro
;
Kumagai, Yuka
论文数: 0引用数: 0
h-index: 0
机构:
Kyoto Univ, Grad Sch Biostudies, Lab Bioimaging & Cell Signaling, Sakyo Ku, Kyoto 6068501, JapanKyoto Univ, Grad Sch Med, Sakyo Ku, Kyoto 6068501, Japan
Kumagai, Yuka
;
Sakurai, Atsuro
论文数: 0引用数: 0
h-index: 0
机构:
Kyoto Univ, Grad Sch Biostudies, Lab Bioimaging & Cell Signaling, Sakyo Ku, Kyoto 6068501, JapanKyoto Univ, Grad Sch Med, Sakyo Ku, Kyoto 6068501, Japan
Sakurai, Atsuro
;
Komatsu, Naoki
论文数: 0引用数: 0
h-index: 0
机构:
Kyoto Univ, Grad Sch Biostudies, Lab Bioimaging & Cell Signaling, Sakyo Ku, Kyoto 6068501, JapanKyoto Univ, Grad Sch Med, Sakyo Ku, Kyoto 6068501, Japan
Komatsu, Naoki
;
Fujita, Yoshihisa
论文数: 0引用数: 0
h-index: 0
机构:
Kyoto Univ, Grad Sch Med, Dept Pathol & Biol Dis, Sakyo Ku, Kyoto 6068501, JapanKyoto Univ, Grad Sch Med, Sakyo Ku, Kyoto 6068501, Japan
Fujita, Yoshihisa
;
Shionyu, Clara
论文数: 0引用数: 0
h-index: 0
机构:
Kyoto Univ, Grad Sch Biostudies, Lab Bioimaging & Cell Signaling, Sakyo Ku, Kyoto 6068501, JapanKyoto Univ, Grad Sch Med, Sakyo Ku, Kyoto 6068501, Japan
Shionyu, Clara
;
Matsuda, Michiyuki
论文数: 0引用数: 0
h-index: 0
机构:
Kyoto Univ, Grad Sch Biostudies, Lab Bioimaging & Cell Signaling, Sakyo Ku, Kyoto 6068501, Japan
Kyoto Univ, Grad Sch Med, Dept Pathol & Biol Dis, Sakyo Ku, Kyoto 6068501, JapanKyoto Univ, Grad Sch Med, Sakyo Ku, Kyoto 6068501, Japan
机构:
Kings Coll London, MRC Ctr Dev Neurobiol, London SE1 1UL, EnglandKings Coll London, MRC Ctr Dev Neurobiol, London SE1 1UL, England
Buckley, Clare E.
;
Moore, Rachel E.
论文数: 0引用数: 0
h-index: 0
机构:
Kings Coll London, MRC Ctr Dev Neurobiol, London SE1 1UL, EnglandKings Coll London, MRC Ctr Dev Neurobiol, London SE1 1UL, England
Moore, Rachel E.
;
Reade, Anna
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif San Francisco, Cardiovasc Res Inst, San Francisco, CA 94158 USA
Univ Calif San Francisco, Dept Biochem & Biophys, San Francisco, CA 94158 USAKings Coll London, MRC Ctr Dev Neurobiol, London SE1 1UL, England
Reade, Anna
;
Goldberg, Anna R.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif San Francisco, Cardiovasc Res Inst, San Francisco, CA 94158 USA
Univ Calif San Francisco, Dept Biochem & Biophys, San Francisco, CA 94158 USAKings Coll London, MRC Ctr Dev Neurobiol, London SE1 1UL, England
Goldberg, Anna R.
;
Weiner, Orion D.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif San Francisco, Cardiovasc Res Inst, San Francisco, CA 94158 USA
Univ Calif San Francisco, Dept Biochem & Biophys, San Francisco, CA 94158 USAKings Coll London, MRC Ctr Dev Neurobiol, London SE1 1UL, England
Weiner, Orion D.
;
Clarke, Jonathan D. W.
论文数: 0引用数: 0
h-index: 0
机构:
Kings Coll London, MRC Ctr Dev Neurobiol, London SE1 1UL, EnglandKings Coll London, MRC Ctr Dev Neurobiol, London SE1 1UL, England
机构:
Howard Hughes Med Inst, Ashburn, VA 20147 USAHoward Hughes Med Inst, Ashburn, VA 20147 USA
Chen, Tsai-Wen
;
Wardill, Trevor J.
论文数: 0引用数: 0
h-index: 0
机构:
Howard Hughes Med Inst, Ashburn, VA 20147 USAHoward Hughes Med Inst, Ashburn, VA 20147 USA
Wardill, Trevor J.
;
Sun, Yi
论文数: 0引用数: 0
h-index: 0
机构:
Howard Hughes Med Inst, Ashburn, VA 20147 USAHoward Hughes Med Inst, Ashburn, VA 20147 USA
Sun, Yi
;
Pulver, Stefan R.
论文数: 0引用数: 0
h-index: 0
机构:
Howard Hughes Med Inst, Ashburn, VA 20147 USAHoward Hughes Med Inst, Ashburn, VA 20147 USA
Pulver, Stefan R.
;
Renninger, Sabine L.
论文数: 0引用数: 0
h-index: 0
机构:
Champalimaud Ctr Unknown, Champalimaud Neurosci Programme, P-1400038 Lisbon, PortugalHoward Hughes Med Inst, Ashburn, VA 20147 USA
Renninger, Sabine L.
;
Baohan, Amy
论文数: 0引用数: 0
h-index: 0
机构:
Howard Hughes Med Inst, Ashburn, VA 20147 USA
Univ Calif Los Angeles, Dept Neurobiol, Los Angeles, CA 90095 USAHoward Hughes Med Inst, Ashburn, VA 20147 USA
Baohan, Amy
;
Schreiter, Eric R.
论文数: 0引用数: 0
h-index: 0
机构:
Howard Hughes Med Inst, Ashburn, VA 20147 USAHoward Hughes Med Inst, Ashburn, VA 20147 USA
Schreiter, Eric R.
;
Kerr, Rex A.
论文数: 0引用数: 0
h-index: 0
机构:
Howard Hughes Med Inst, Ashburn, VA 20147 USAHoward Hughes Med Inst, Ashburn, VA 20147 USA
Kerr, Rex A.
;
Orger, Michael B.
论文数: 0引用数: 0
h-index: 0
机构:
Champalimaud Ctr Unknown, Champalimaud Neurosci Programme, P-1400038 Lisbon, PortugalHoward Hughes Med Inst, Ashburn, VA 20147 USA
Orger, Michael B.
;
Jayaraman, Vivek
论文数: 0引用数: 0
h-index: 0
机构:
Howard Hughes Med Inst, Ashburn, VA 20147 USAHoward Hughes Med Inst, Ashburn, VA 20147 USA
Jayaraman, Vivek
;
Looger, Loren L.
论文数: 0引用数: 0
h-index: 0
机构:
Howard Hughes Med Inst, Ashburn, VA 20147 USAHoward Hughes Med Inst, Ashburn, VA 20147 USA
Looger, Loren L.
;
Svoboda, Karel
论文数: 0引用数: 0
h-index: 0
机构:
Howard Hughes Med Inst, Ashburn, VA 20147 USAHoward Hughes Med Inst, Ashburn, VA 20147 USA
Svoboda, Karel
;
Kim, Douglas S.
论文数: 0引用数: 0
h-index: 0
机构:
Howard Hughes Med Inst, Ashburn, VA 20147 USAHoward Hughes Med Inst, Ashburn, VA 20147 USA
机构:
Columbia Univ, Dept Biol Sci, New York, NY 10027 USA
Columbia Univ, Dept Biochem & Mol Biophys, Med Ctr, 630 W 168th St, New York, NY 10027 USAColumbia Univ, Dept Biol Sci, New York, NY 10027 USA
de la Cova, Claire
;
论文数: 引用数:
h-index:
机构:
Townley, Robert
;
Regot, Sergi
论文数: 0引用数: 0
h-index: 0
机构:
Johns Hopkins Univ, Sch Med, Dept Mol Biol & Genet, Baltimore, MD 21205 USAColumbia Univ, Dept Biol Sci, New York, NY 10027 USA
Regot, Sergi
;
Greenwald, Iva
论文数: 0引用数: 0
h-index: 0
机构:
Columbia Univ, Dept Biol Sci, New York, NY 10027 USA
Columbia Univ, Dept Biochem & Mol Biophys, Med Ctr, 630 W 168th St, New York, NY 10027 USAColumbia Univ, Dept Biol Sci, New York, NY 10027 USA
机构:
Kyoto Univ, Grad Sch Med, Sakyo Ku, Kyoto 6068501, JapanKyoto Univ, Grad Sch Med, Sakyo Ku, Kyoto 6068501, Japan
Aoki, Kazuhiro
;
Kumagai, Yuka
论文数: 0引用数: 0
h-index: 0
机构:
Kyoto Univ, Grad Sch Biostudies, Lab Bioimaging & Cell Signaling, Sakyo Ku, Kyoto 6068501, JapanKyoto Univ, Grad Sch Med, Sakyo Ku, Kyoto 6068501, Japan
Kumagai, Yuka
;
Sakurai, Atsuro
论文数: 0引用数: 0
h-index: 0
机构:
Kyoto Univ, Grad Sch Biostudies, Lab Bioimaging & Cell Signaling, Sakyo Ku, Kyoto 6068501, JapanKyoto Univ, Grad Sch Med, Sakyo Ku, Kyoto 6068501, Japan
Sakurai, Atsuro
;
Komatsu, Naoki
论文数: 0引用数: 0
h-index: 0
机构:
Kyoto Univ, Grad Sch Biostudies, Lab Bioimaging & Cell Signaling, Sakyo Ku, Kyoto 6068501, JapanKyoto Univ, Grad Sch Med, Sakyo Ku, Kyoto 6068501, Japan
Komatsu, Naoki
;
Fujita, Yoshihisa
论文数: 0引用数: 0
h-index: 0
机构:
Kyoto Univ, Grad Sch Med, Dept Pathol & Biol Dis, Sakyo Ku, Kyoto 6068501, JapanKyoto Univ, Grad Sch Med, Sakyo Ku, Kyoto 6068501, Japan
Fujita, Yoshihisa
;
Shionyu, Clara
论文数: 0引用数: 0
h-index: 0
机构:
Kyoto Univ, Grad Sch Biostudies, Lab Bioimaging & Cell Signaling, Sakyo Ku, Kyoto 6068501, JapanKyoto Univ, Grad Sch Med, Sakyo Ku, Kyoto 6068501, Japan
Shionyu, Clara
;
Matsuda, Michiyuki
论文数: 0引用数: 0
h-index: 0
机构:
Kyoto Univ, Grad Sch Biostudies, Lab Bioimaging & Cell Signaling, Sakyo Ku, Kyoto 6068501, Japan
Kyoto Univ, Grad Sch Med, Dept Pathol & Biol Dis, Sakyo Ku, Kyoto 6068501, JapanKyoto Univ, Grad Sch Med, Sakyo Ku, Kyoto 6068501, Japan
机构:
Kings Coll London, MRC Ctr Dev Neurobiol, London SE1 1UL, EnglandKings Coll London, MRC Ctr Dev Neurobiol, London SE1 1UL, England
Buckley, Clare E.
;
Moore, Rachel E.
论文数: 0引用数: 0
h-index: 0
机构:
Kings Coll London, MRC Ctr Dev Neurobiol, London SE1 1UL, EnglandKings Coll London, MRC Ctr Dev Neurobiol, London SE1 1UL, England
Moore, Rachel E.
;
Reade, Anna
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif San Francisco, Cardiovasc Res Inst, San Francisco, CA 94158 USA
Univ Calif San Francisco, Dept Biochem & Biophys, San Francisco, CA 94158 USAKings Coll London, MRC Ctr Dev Neurobiol, London SE1 1UL, England
Reade, Anna
;
Goldberg, Anna R.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif San Francisco, Cardiovasc Res Inst, San Francisco, CA 94158 USA
Univ Calif San Francisco, Dept Biochem & Biophys, San Francisco, CA 94158 USAKings Coll London, MRC Ctr Dev Neurobiol, London SE1 1UL, England
Goldberg, Anna R.
;
Weiner, Orion D.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif San Francisco, Cardiovasc Res Inst, San Francisco, CA 94158 USA
Univ Calif San Francisco, Dept Biochem & Biophys, San Francisco, CA 94158 USAKings Coll London, MRC Ctr Dev Neurobiol, London SE1 1UL, England
Weiner, Orion D.
;
Clarke, Jonathan D. W.
论文数: 0引用数: 0
h-index: 0
机构:
Kings Coll London, MRC Ctr Dev Neurobiol, London SE1 1UL, EnglandKings Coll London, MRC Ctr Dev Neurobiol, London SE1 1UL, England
机构:
Howard Hughes Med Inst, Ashburn, VA 20147 USAHoward Hughes Med Inst, Ashburn, VA 20147 USA
Chen, Tsai-Wen
;
Wardill, Trevor J.
论文数: 0引用数: 0
h-index: 0
机构:
Howard Hughes Med Inst, Ashburn, VA 20147 USAHoward Hughes Med Inst, Ashburn, VA 20147 USA
Wardill, Trevor J.
;
Sun, Yi
论文数: 0引用数: 0
h-index: 0
机构:
Howard Hughes Med Inst, Ashburn, VA 20147 USAHoward Hughes Med Inst, Ashburn, VA 20147 USA
Sun, Yi
;
Pulver, Stefan R.
论文数: 0引用数: 0
h-index: 0
机构:
Howard Hughes Med Inst, Ashburn, VA 20147 USAHoward Hughes Med Inst, Ashburn, VA 20147 USA
Pulver, Stefan R.
;
Renninger, Sabine L.
论文数: 0引用数: 0
h-index: 0
机构:
Champalimaud Ctr Unknown, Champalimaud Neurosci Programme, P-1400038 Lisbon, PortugalHoward Hughes Med Inst, Ashburn, VA 20147 USA
Renninger, Sabine L.
;
Baohan, Amy
论文数: 0引用数: 0
h-index: 0
机构:
Howard Hughes Med Inst, Ashburn, VA 20147 USA
Univ Calif Los Angeles, Dept Neurobiol, Los Angeles, CA 90095 USAHoward Hughes Med Inst, Ashburn, VA 20147 USA
Baohan, Amy
;
Schreiter, Eric R.
论文数: 0引用数: 0
h-index: 0
机构:
Howard Hughes Med Inst, Ashburn, VA 20147 USAHoward Hughes Med Inst, Ashburn, VA 20147 USA
Schreiter, Eric R.
;
Kerr, Rex A.
论文数: 0引用数: 0
h-index: 0
机构:
Howard Hughes Med Inst, Ashburn, VA 20147 USAHoward Hughes Med Inst, Ashburn, VA 20147 USA
Kerr, Rex A.
;
Orger, Michael B.
论文数: 0引用数: 0
h-index: 0
机构:
Champalimaud Ctr Unknown, Champalimaud Neurosci Programme, P-1400038 Lisbon, PortugalHoward Hughes Med Inst, Ashburn, VA 20147 USA
Orger, Michael B.
;
Jayaraman, Vivek
论文数: 0引用数: 0
h-index: 0
机构:
Howard Hughes Med Inst, Ashburn, VA 20147 USAHoward Hughes Med Inst, Ashburn, VA 20147 USA
Jayaraman, Vivek
;
Looger, Loren L.
论文数: 0引用数: 0
h-index: 0
机构:
Howard Hughes Med Inst, Ashburn, VA 20147 USAHoward Hughes Med Inst, Ashburn, VA 20147 USA
Looger, Loren L.
;
Svoboda, Karel
论文数: 0引用数: 0
h-index: 0
机构:
Howard Hughes Med Inst, Ashburn, VA 20147 USAHoward Hughes Med Inst, Ashburn, VA 20147 USA
Svoboda, Karel
;
Kim, Douglas S.
论文数: 0引用数: 0
h-index: 0
机构:
Howard Hughes Med Inst, Ashburn, VA 20147 USAHoward Hughes Med Inst, Ashburn, VA 20147 USA
机构:
Columbia Univ, Dept Biol Sci, New York, NY 10027 USA
Columbia Univ, Dept Biochem & Mol Biophys, Med Ctr, 630 W 168th St, New York, NY 10027 USAColumbia Univ, Dept Biol Sci, New York, NY 10027 USA
de la Cova, Claire
;
论文数: 引用数:
h-index:
机构:
Townley, Robert
;
Regot, Sergi
论文数: 0引用数: 0
h-index: 0
机构:
Johns Hopkins Univ, Sch Med, Dept Mol Biol & Genet, Baltimore, MD 21205 USAColumbia Univ, Dept Biol Sci, New York, NY 10027 USA
Regot, Sergi
;
Greenwald, Iva
论文数: 0引用数: 0
h-index: 0
机构:
Columbia Univ, Dept Biol Sci, New York, NY 10027 USA
Columbia Univ, Dept Biochem & Mol Biophys, Med Ctr, 630 W 168th St, New York, NY 10027 USAColumbia Univ, Dept Biol Sci, New York, NY 10027 USA