Identification of Immuno-Inflammation-Related Biomarkers for Acute Myocardial Infarction Based on Bioinformatics

被引:6
作者
You, Hongjun [1 ]
Dong, Mengya [1 ]
机构
[1] Shaanxi Prov Peoples Hosp, Dept Cardiovasc Med, Xian 710068, Shaanxi, Peoples R China
关键词
acute myocardial infarction; immune-related gene; inflammation-related gene; biomarker; nomogram; CORONARY-ARTERY-DISEASE; ARTIFICIAL-INTELLIGENCE; BEVACIZUMAB; MODELS;
D O I
10.2147/JIR.S421196
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
Purpose: Previous studies have confirmed that inflammation and immunity are involved in the pathogenesis of acute myocardial infarction (AMI). However, only few related genes are identified as biomarkers for the diagnosis and treatment of AMI. Patients andMethods: GSE48060 and GSE60993 datasets were retrieved from Gene Expression Omnibus. The differentially expressed immuno-inflammation-related genes (DEIIRGs) were obtained from GSE48060, and the biomarkers for AMI were screened and validated using the "Neuralnet" package and GSE60993 dataset. Further, the biomarker-based nomogram was constructed, and miRNAs, transcrip-tion factors (TFs), and potential drugs targeting the biomarkers were explored. Furthermore, immune infiltration analysis was analyzed in AMI. Finally, the biomarkers were verified by assessing their mRNA levels using real-time quantitative PCR (RT-qPCR).Results: First, eight biomarkers were screened via bioinformatics, and the artificial neural network model indicated a higher prediction accuracy for AMI even in the validation dataset. Nomogram had accurate forecasting ability for AMI as well. The TFs GTF2I, PHOX2B, RUNX1, and FOS targeting hsa-miR-1297 could regulate the expressions of ADM and CBLB, and RORA could effectively interact with melatonin and citalopram. RT-qPCR results for ADM, PI3, MMP9, NRG1 and CBLB were consistent with those of bioinformatic analysis.Conclusion: In conclusion, eight key immuno-inflammation-related genes, namely, SH2D1B, ADM, PI3, MMP9, NRG1, CBLB, RORA, and FASLG, may serve as the potential biomarkers for AMI, in which the downregulation of CBLB and upregulation of ADM, PI3, and NRG1 in AMI was detected for the first time, providing a new strategy for the diagnosis and treatment of AMI.
引用
收藏
页码:3283 / 3302
页数:20
相关论文
共 99 条
  • [1] Metabolomics analysis and biological investigation of three Malvaceae plants
    Abdelhafez, Omnia Hesham
    Othman, Eman Maher
    Fahim, John Refaat
    Desoukey, Samar Yehia
    Pimentel-Elardo, Sheila Marie
    Nodwell, Justin R.
    Schirmeister, Tanja
    Tawfike, Ahmed
    Abdelmohsen, Usama Ramadan
    [J]. PHYTOCHEMICAL ANALYSIS, 2020, 31 (02) : 204 - 214
  • [2] The PI3K/Akt Pathway in Meta-Inflammation
    Acosta-Martinez, Maricedes
    Cabail, Maria Zulema
    [J]. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2022, 23 (23)
  • [3] The year in cardiovascularmedicine 2020: interventional cardiology
    Alfonso, Fernando
    Gonzalo, Nieves
    Rivero, Fernando
    Escaned, Javier
    [J]. EUROPEAN HEART JOURNAL, 2021, 42 (10) : 985 - 1003
  • [4] Immune cells as targets for cardioprotection: new players and novel therapeutic opportunities
    Andreadou, Ioanna
    Cabrera-Fuentes, Hector A.
    Devaux, Yvan
    Frangogiannis, Nikolaos G.
    Frantz, Stefan
    Guzik, Tomasz
    Liehn, Elisa A.
    Gomes, Clarissa P. C.
    Schulz, Rainer
    Hausenloy, Derek J.
    [J]. CARDIOVASCULAR RESEARCH, 2019, 115 (07) : 1117 - 1130
  • [5] Bevacizumab encapsulation into PLGA nanoparticles functionalized with immunouteroglobin-1 as an innovative delivery system for atherosclerosis
    Atanasio, Giulia De Negri
    Ferrari, Pier Francesco
    Baia, Ana
    Perego, Patrizia
    Sarmento, Bruno
    Palombo, Domenico
    Campardelli, Roberta
    [J]. INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 2022, 221 : 1618 - 1630
  • [6] Targeting Cbl-b in cancer immunotherapy
    Augustin, Ryan C.
    Bao, Riyue
    Luke, Jason J.
    [J]. JOURNAL FOR IMMUNOTHERAPY OF CANCER, 2023, 11 (02)
  • [7] Biomarkers in acute myocardial infarction: current perspectives
    Aydin, Suleyman
    Ugur, Kader
    Aydin, Suna
    Sahin, Ibrahim
    Yardim, Meltem
    [J]. VASCULAR HEALTH AND RISK MANAGEMENT, 2019, 15 : 1 - 10
  • [8] The effect of myeloperoxidase-oxidized LDL on THP-1 macrophage polarization and repolarization
    Bazzi, Samer
    Frangie, Christian
    Azar, Eliana
    Daher, Jalil
    [J]. INNATE IMMUNITY, 2022, 28 (02) : 91 - 103
  • [9] Spatiotemporal Dynamics of Immune Cells in Early Left Ventricular Remodeling After Acute Myocardial Infarction in Mice
    Bejjani, Anthony T.
    Saab, Sally A.
    Muhieddine, Dina H.
    Habeichi, Nada J.
    Booz, George W.
    Zouein, Fouad A.
    [J]. JOURNAL OF CARDIOVASCULAR PHARMACOLOGY, 2020, 75 (02) : 112 - 122
  • [10] Weak associations between human leucocyte antigen genotype and acute myocardial infarction
    Bjorkbacka, H.
    Lavant, E. H.
    Fredrikson, G. N.
    Melander, O.
    Berglund, G.
    Carlson, J. A.
    Nilsson, J.
    [J]. JOURNAL OF INTERNAL MEDICINE, 2010, 268 (01) : 50 - 58