Machine learning-based amide proton transfer imaging using partially synthetic training data

被引:3
|
作者
Viswanathan, Malvika [1 ,2 ]
Yin, Leqi [3 ]
Kurmi, Yashwant [1 ,4 ]
Zu, Zhongliang [1 ,2 ,4 ,5 ]
机构
[1] Vanderbilt Univ, Med Ctr, Vanderbilt Univ Inst Imaging Sci, Nashville, TN 37232 USA
[2] Vanderbilt Univ, Dept Biomed Engn, Nashville, TN 37232 USA
[3] Vanderbilt Univ, Sch Engn, Nashville, TN 37232 USA
[4] Vanderbilt Univ, Med Ctr, Dept Radiol & Radiol Sci, Nashville, TN 37232 USA
[5] Vanderbilt Univ, Inst Imaging Sci, Nashville, TN 37232 USA
基金
美国国家卫生研究院;
关键词
amide proton transfer; chemical exchange saturation transfer; machine learning; tumor; EXCHANGE SATURATION-TRANSFER; IN-VIVO; TRANSFER CEST; TRANSFER MRI; HUMAN BRAIN; RESONANCE; ENHANCEMENT; RELAXATION; CONTRAST; ORIGINS;
D O I
10.1002/mrm.29970
中图分类号
R8 [特种医学]; R445 [影像诊断学];
学科分类号
1002 ; 100207 ; 1009 ;
摘要
Purpose: Machine learning (ML) has been increasingly used to quantify CEST effect. ML models are typically trained using either measured data or fully simulated data. However, training with measured data often lacks sufficient training data, whereas training with fully simulated data may introduce bias because of limited simulations pools. This study introduces a new platform that combines simulated and measured components to generate partially synthetic CEST data, and to evaluate its feasibility for training ML models to predict amide proton transfer (APT) effect.Methods: Partially synthetic CEST signals were created using an inverse summation of APT effects from simulations and the other components from measurements. Training data were generated by varying APT simulation parameters and applying scaling factors to adjust the measured components, achieving a balance between simulation flexibility and fidelity. First, tissue-mimicking CEST signals along with ground truth information were created using multiple-pool model simulations to validate this method. Second, an ML model was trained individually on partially synthetic data, in vivo data, and fully simulated data, to predict APT effect in rat brains bearing 9 L tumors.Results: Experiments on tissue-mimicking data suggest that the ML method using the partially synthetic data is accurate in predicting APT. In vivo experiments suggest that our method provides more accurate and robust prediction than the training using in vivo data and fully synthetic data.Conclusion: Partially synthetic CEST data can address the challenges in conventional ML methods.
引用
收藏
页码:1908 / 1922
页数:15
相关论文
共 50 条
  • [41] Supervised machine learning using encrypted training data
    Gonzalez-Serrano, Francisco-Javier
    Amor-Martin, Adrian
    Casamayon-Anton, Jorge
    INTERNATIONAL JOURNAL OF INFORMATION SECURITY, 2018, 17 (04) : 365 - 377
  • [42] Exploring Transfer Learning to Reduce Training Overhead of HPC Data in Machine Learning
    Liu, Tong
    Alibhai, Shakeel
    Wang, Jinzhen
    Liu, Qing
    He, Xubin
    Wu, Chentao
    2019 IEEE INTERNATIONAL CONFERENCE ON NETWORKING, ARCHITECTURE AND STORAGE (NAS), 2019, : 75 - 81
  • [43] Supervised machine learning using encrypted training data
    Francisco-Javier González-Serrano
    Adrián Amor-Martín
    Jorge Casamayón-Antón
    International Journal of Information Security, 2018, 17 : 365 - 377
  • [44] MALMOS: Machine Learning-based Mobile Offloading Scheduler with Online Training
    Eom, Heungsik
    Figueiredo, Renato
    Cai, Huaqian
    Zhang, Ying
    Huang, Gang
    2015 3RD IEEE INTERNATIONAL CONFERENCE ON MOBILE CLOUD COMPUTING, SERVICES, AND ENGINEERING (MOBILECLOUD 2015), 2015, : 51 - 60
  • [45] Supervised Machine Learning-based Routing for Named Data Networking
    Mekinda, Leonce
    Muscariello, Luca
    2016 IEEE GLOBAL COMMUNICATIONS CONFERENCE (GLOBECOM), 2016,
  • [46] How Training Data Impacts Performance in Learning-Based Control
    Lederer, Armin
    Capone, Alexandre
    Umlauft, Jonas
    Hirche, Sandra
    IEEE CONTROL SYSTEMS LETTERS, 2021, 5 (03): : 905 - 910
  • [47] Machine Learning-Based Intrusion Detection System For Healthcare Data
    Balyan, Amit Kumar
    Ahuja, Sachin
    Sharma, Sanjeev Kumar
    Lilhore, Umesh Kumar
    PROCEEDINGS OF 3RD IEEE CONFERENCE ON VLSI DEVICE, CIRCUIT AND SYSTEM (IEEE VLSI DCS 2022), 2022, : 290 - 294
  • [48] Machine Learning-Based Pain Severity Classification of Lumbosacral Radiculopathy Using Infrared Thermal Imaging
    Rim, Jinu
    Ryu, Seungjun
    Jang, Hyunjun
    Zhang, Hoyeol
    Cho, Yongeun
    APPLIED SCIENCES-BASEL, 2023, 13 (06):
  • [49] Editorial: Machine Learning-Based Methods for RNA Data Analysis
    Peng, Lihong
    Yang, Jialiang
    Wang, Minxian
    Zhou, Liqian
    FRONTIERS IN GENETICS, 2022, 13
  • [50] Machine learning-based classification of chronic traumatic brain injury using hybrid diffusion imaging
    Muller, Jennifer J.
    Wang, Ruixuan
    Milddleton, Devon
    Alizadeh, Mahdi
    Kang, Ki Chang
    Hryczyk, Ryan
    Zabrecky, George
    Hriso, Chloe
    Navarreto, Emily
    Wintering, Nancy
    Bazzan, Anthony J.
    Wu, Chengyuan
    Monti, Daniel A.
    Jiao, Xun
    Wu, Qianhong
    Newberg, Andrew B.
    Mohamed, Feroze B.
    FRONTIERS IN NEUROSCIENCE, 2023, 17