Machine learning-based amide proton transfer imaging using partially synthetic training data

被引:3
|
作者
Viswanathan, Malvika [1 ,2 ]
Yin, Leqi [3 ]
Kurmi, Yashwant [1 ,4 ]
Zu, Zhongliang [1 ,2 ,4 ,5 ]
机构
[1] Vanderbilt Univ, Med Ctr, Vanderbilt Univ Inst Imaging Sci, Nashville, TN 37232 USA
[2] Vanderbilt Univ, Dept Biomed Engn, Nashville, TN 37232 USA
[3] Vanderbilt Univ, Sch Engn, Nashville, TN 37232 USA
[4] Vanderbilt Univ, Med Ctr, Dept Radiol & Radiol Sci, Nashville, TN 37232 USA
[5] Vanderbilt Univ, Inst Imaging Sci, Nashville, TN 37232 USA
基金
美国国家卫生研究院;
关键词
amide proton transfer; chemical exchange saturation transfer; machine learning; tumor; EXCHANGE SATURATION-TRANSFER; IN-VIVO; TRANSFER CEST; TRANSFER MRI; HUMAN BRAIN; RESONANCE; ENHANCEMENT; RELAXATION; CONTRAST; ORIGINS;
D O I
10.1002/mrm.29970
中图分类号
R8 [特种医学]; R445 [影像诊断学];
学科分类号
1002 ; 100207 ; 1009 ;
摘要
Purpose: Machine learning (ML) has been increasingly used to quantify CEST effect. ML models are typically trained using either measured data or fully simulated data. However, training with measured data often lacks sufficient training data, whereas training with fully simulated data may introduce bias because of limited simulations pools. This study introduces a new platform that combines simulated and measured components to generate partially synthetic CEST data, and to evaluate its feasibility for training ML models to predict amide proton transfer (APT) effect.Methods: Partially synthetic CEST signals were created using an inverse summation of APT effects from simulations and the other components from measurements. Training data were generated by varying APT simulation parameters and applying scaling factors to adjust the measured components, achieving a balance between simulation flexibility and fidelity. First, tissue-mimicking CEST signals along with ground truth information were created using multiple-pool model simulations to validate this method. Second, an ML model was trained individually on partially synthetic data, in vivo data, and fully simulated data, to predict APT effect in rat brains bearing 9 L tumors.Results: Experiments on tissue-mimicking data suggest that the ML method using the partially synthetic data is accurate in predicting APT. In vivo experiments suggest that our method provides more accurate and robust prediction than the training using in vivo data and fully synthetic data.Conclusion: Partially synthetic CEST data can address the challenges in conventional ML methods.
引用
收藏
页码:1908 / 1922
页数:15
相关论文
共 50 条
  • [11] A Machine Learning-Based Detection of Earthquake Precursors Using Ionospheric Data
    Akyol, A. A.
    Arikan, O.
    Arikan, F.
    RADIO SCIENCE, 2020, 55 (11)
  • [12] Machine learning-based approaches for cancer prediction using microbiome data
    Freitas, Pedro
    Silva, Francisco
    Sousa, Joana Vale
    Ferreira, Rui M.
    Figueiredo, Ceu
    Pereira, Tania
    Oliveira, Helder P.
    SCIENTIFIC REPORTS, 2023, 13 (01):
  • [13] Generating Synthetic Mechanocardiograms for Machine Learning-Based Peak Detection
    Sandelin, Jonas
    Elnaggar, Ismail
    Lahdenoja, Olli
    Kaisti, Matti
    Koivisto, Tero
    IEEE SENSORS LETTERS, 2024, 8 (10)
  • [14] FSscore: A Personalized Machine Learning-Based Synthetic Feasibility Score
    Neeser, Rebecca M.
    Correia, Bruno
    Schwaller, Philippe
    CHEMISTRY-METHODS, 2024, 4 (11):
  • [15] Machine learning-based defect characterization in anisotropic materials with IR-thermography synthetic data
    Daghigh, Vahid
    Naraghi, Mohammad
    COMPOSITES SCIENCE AND TECHNOLOGY, 2023, 233
  • [16] Machine Learning-Based Prediction of Cattle Activity Using Sensor-Based Data
    Hernandez, Guillermo
    Gonzalez-Sanchez, Carlos
    Gonzalez-Arrieta, Angelica
    Sanchez-Brizuela, Guillermo
    Fraile, Juan-Carlos
    SENSORS, 2024, 24 (10)
  • [17] Machine learning-based blood pressure estimation using impedance cardiography data
    Bothe, T. L.
    Patzak, A.
    Opatz, O. S.
    Heinz, V.
    Pilz, N.
    ACTA PHYSIOLOGICA, 2025, 241 (02)
  • [18] Machine learning-based colorectal cancer prediction using global dietary data
    Hanif Abdul Rahman
    Mohammad Ashraf Ottom
    Ivo D. Dinov
    BMC Cancer, 23
  • [19] Machine learning-based colorectal cancer prediction using global dietary data
    Abdul Rahman, Hanif
    Ottom, Mohammad Ashraf
    Dinov, Ivo D.
    BMC CANCER, 2023, 23 (01)
  • [20] Machine learning-based prediction of diabetic patients using blood routine data
    Li, Honghao
    Su, Dongqing
    Zhang, Xinpeng
    He, Yuanyuan
    Luo, Xu
    Xiong, Yuqiang
    Zou, Min
    Wei, Huiyan
    Wen, Shaoran
    Xi, Qilemuge
    Zuo, Yongchun
    Yang, Lei
    METHODS, 2024, 229 : 156 - 162