The utility of exome sequencing in diagnosing pediatric neurodevelopmental disorders in a highly consanguineous population

被引:2
作者
Khalaf, Tamam [1 ]
Al Ojaimi, Mode [2 ,3 ]
Saleh, Dina Amin [4 ,5 ]
Sulaiman, Alena [6 ]
Sohal, Aman P. [7 ,8 ]
Khan, Arif [7 ,9 ,10 ,11 ]
El-Hattab, Ayman W. [2 ,3 ]
机构
[1] Igenomix, Genet Counseling Div, Dubai, U Arab Emirates
[2] Univ Sharjah, Coll Med, Dept Clin Sci, Sharjah, U Arab Emirates
[3] Univ Hosp Sharjah, Dept Pediat, Sharjah, U Arab Emirates
[4] Amer Ctr Psychiat & Neurol, Pediat Neurol Div, Abu Dhabi, U Arab Emirates
[5] Ain Shams Univ, Fac Med, Dept Pediat, Cairo, Egypt
[6] KidsHeart Med Ctr, Pediat Div, Abu Dhabi, U Arab Emirates
[7] Neuropedia Childrens Neurosci Ctr, Pediat Neurol Div, Dubai, U Arab Emirates
[8] Al Qassimi Women & Childrens Hosp, Pediat Neurol Div, Sharjah, U Arab Emirates
[9] Kings Coll Hosp London, Pediat Div, Dubai, U Arab Emirates
[10] Kids Neuro Clin, Pediat Neurol Div, Dubai, U Arab Emirates
[11] Rehab Ctr, Dubai, U Arab Emirates
关键词
candidate genes; consanguinity; exome sequencing; neurodevelopmental; novel variants; pediatric; CLINICAL EXOME;
D O I
10.1111/cge.14508
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Exome sequencing (ES) has been utilized in diagnosing children with neurodevelopmental manifestations, this study aimed to investigate the utility of ES in children within a highly consanguineous population that presented with neurodevelopmental complaints. A retrospective chart review was performed for 405 children with neurodevelopmental complaints who have had ES and were evaluated in multiple centers in the United Arab Emirates over a four-year period. Within the cohort of 405 children, consanguinity was reported in 35% (144/405). The primary clinical presentations were developmental delay/cognitive impairment, distinctive facial features, hypotonia, seizures, and weakness. The diagnostic yield was 57% (231/405). Novel variants were identified in 54% (125/231) of positive cases. Within the positive cases, specific treatment was available in 6% (13/231) and copy number variants (CNV) were reported in 3% (8/231) of cases. In eight children, variants in genes that have not yet been linked to human disease that could potentially be the cause of the observed phenotype "candidate genes" were identified. ES was utilized effectively within this cohort with a high diagnostic yield and through the identification of novel gene variants, CNVs, candidate genes and secondary findings as well as the alteration of the treatment plan in cases where treatment was available. This study presents the clinical and molecular data of 405 children with neurodevelopmental manifestations from a highly consanguineous population who underwent exome sequencing. The utility of exome sequencing was addressed through the identification of novel variants, diagnosing copy number variations, impacting treatment, uncovering secondary findings, and identifying candidate genes. image
引用
收藏
页码:82 / 89
页数:8
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