Determination of optimal potential parameters for the self-assembly of various lattice structures

被引:0
作者
Kim, Jae-Hyun [1 ]
Cho, Seonho [2 ,3 ]
机构
[1] Samsung Elect, Hwaseong Si, South Korea
[2] Seoul Natl Univ, Dept Naval Architecture & Ocean Engn, Seoul, South Korea
[3] Seoul Natl Univ, Dept Naval Architecture & Ocean Engn, 1 Gwanak Ro, Seoul, South Korea
关键词
Self-assembly; optimal design; pair-wise isotropic potentials; Fourier transform; reciprocal space; potential parameters; low-coordinated crystals; lattice structures; DESIGN;
D O I
10.1080/20550324.2023.2170028
中图分类号
TB3 [工程材料学];
学科分类号
0805 ; 080502 ;
摘要
We present a gradient-based optimization method that precisely designs simplified isotropic potentials for self-assembly of targeted lattice structures. An ansatz potential and its constraints are constructed to directly reflect the characteristics of a Bravais lattice for the target crystal, and the method is able to design the simplified potential systematically and smoothly. The potential is simplified with a Gaussian function in reciprocal space to minimize the information loss caused by Fourier transform in each design update. Design optimization formulation is derived using design sensitivity to relative entropy, employing a Fourier-Filtered Relative Entropy Minimization (FF-REM) formulation embedded in LAMMPS code to be used as an optimization tool. The potential obtained through this optimization method can successfully self-assemble low-coordinated crystals, such as square, triangle, honeycomb, and Kagome lattices, without further smoothing techniques. It turns out that completely removing the competitive alternative structures is an important condition for improving stability in self-assembling the target lattice in various density ranges.
引用
收藏
页码:18 / 29
页数:12
相关论文
共 32 条
[1]   Inverse design of simple pair potentials for the self-assembly of complex structures [J].
Adorf, Carl S. ;
Antonaglia, James ;
Dshemuchadse, Julia ;
Glotzer, Sharon C. .
JOURNAL OF CHEMICAL PHYSICS, 2018, 149 (20)
[2]  
[Anonymous], 2012, Bayesian reasoning and machine learning, DOI DOI 10.1017/CBO9780511804779
[3]   Multiblock Polymers: Panacea or Pandora's Box? [J].
Bates, Frank S. ;
Hillmyer, Marc A. ;
Lodge, Timothy P. ;
Bates, Christopher M. ;
Delaney, Kris T. ;
Fredrickson, Glenn H. .
SCIENCE, 2012, 336 (6080) :434-440
[4]  
Borowko M editor., 2019, COMPUTATIONAL METHOD
[5]   Design and self-assembly of open, regular, 3D mesostructures [J].
Breen, TL ;
Tien, J ;
Oliver, SRJ ;
Hadzic, T ;
Whitesides, GM .
SCIENCE, 1999, 284 (5416) :948-951
[6]   Coarse-graining errors and numerical optimization using a relative entropy framework [J].
Chaimovich, Aviel ;
Shell, M. Scott .
JOURNAL OF CHEMICAL PHYSICS, 2011, 134 (09)
[7]   The Protein-Folding Problem, 50 Years On [J].
Dill, Ken A. ;
MacCallum, Justin L. .
SCIENCE, 2012, 338 (6110) :1042-1046
[8]   Using the uncertainty principle to design simple interactions for targeted self-assembly [J].
Edlund, E. ;
Lindgren, O. ;
Jacobi, M. Nilsson .
JOURNAL OF CHEMICAL PHYSICS, 2013, 139 (02)
[9]   Designing Isotropic Interactions for Self-Assembly of Complex Lattices [J].
Edlund, E. ;
Lindgren, O. ;
Jacobi, M. Nilsson .
PHYSICAL REVIEW LETTERS, 2011, 107 (08)
[10]   The uncertainty principle: A mathematical survey [J].
Folland, GB ;
Sitaram, A .
JOURNAL OF FOURIER ANALYSIS AND APPLICATIONS, 1997, 3 (03) :207-238