Explainable fuzzy clustering framework reveals divergent default mode network connectivity dynamics in schizophrenia

被引:1
作者
Ellis, Charles A. [1 ,2 ,3 ,4 ]
Miller, Robyn L. [3 ,4 ,5 ]
Calhoun, Vince D. [1 ,2 ,3 ,4 ,5 ]
机构
[1] Georgia Inst Technol, Wallace H Coulter Dept Biomed Engn, Atlanta, GA 30332 USA
[2] Emory Univ, Atlanta, GA 30322 USA
[3] Georgia State Univ, Triinst Ctr Translat Res Neuroimaging & Data Sci, Atlanta, GA 30303 USA
[4] Emory Univ, Georgia Inst Technol, Atlanta, GA 30332 USA
[5] Georgia State Univ, Dept Comp Sci, Atlanta, GA USA
来源
FRONTIERS IN PSYCHIATRY | 2024年 / 15卷
基金
美国国家卫生研究院;
关键词
explainable AI; fuzzy clustering; dynamical functional network connectivity; resting state functional magnetic resonance imaging; schizophrenia; default mode network; FUNCTIONAL CONNECTIVITY; CINGULATE CORTEX; PRECUNEUS; COGNITION; PATTERNS;
D O I
10.3389/fpsyt.2024.1165424
中图分类号
R749 [精神病学];
学科分类号
100205 ;
摘要
Introduction Dynamic functional network connectivity (dFNC) analysis of resting state functional magnetic resonance imaging data has yielded insights into many neurological and neuropsychiatric disorders. A common dFNC analysis approach uses hard clustering methods like k-means clustering to assign samples to states that summarize network dynamics. However, hard clustering methods obscure network dynamics by assuming (1) that all samples within a cluster are equally like their assigned centroids and (2) that samples closer to one another in the data space than to their centroids are well-represented by their centroids. In addition, it can be hard to compare subjects, as in some cases an individual may not manifest a state strongly enough to enter a hard cluster. Approaches that allow a dimensional approach to connectivity patterns (e.g., fuzzy clustering) can mitigate these issues. In this study, we present an explainable fuzzy clustering framework by combining fuzzy c-means clustering with several explainability metrics and novel summary features.Methods We apply our framework for schizophrenia (SZ) default mode network analysis. Namely, we extract dFNC from individuals with SZ and controls, identify 5 dFNC states, and characterize the dFNC features most crucial to those states with a new perturbation-based clustering explainability approach. We then extract several features typically used in hard clustering and further present a variety of unique features specially designed for use with fuzzy clustering to quantify state dynamics. We examine differences in those features between individuals with SZ and controls and further search for relationships between those features and SZ symptom severity.Results Importantly, we find that individuals with SZ spend more time in states of moderate anticorrelation between the anterior and posterior cingulate cortices and strong anticorrelation between the precuneus and anterior cingulate cortex. We further find that individuals with SZ tend to transition more rapidly than controls between low-magnitude and high-magnitude dFNC states.Conclusion We present a novel dFNC analysis framework and use it to identify effects of SZ upon network dynamics. Given the ease of implementing our framework and its enhanced insight into network dynamics, it has great potential for use in future dFNC studies.
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页数:13
相关论文
共 83 条
  • [31] Dynamic functional network reconfiguration underlying the pathophysiology of schizophrenia and autism spectrum disorder
    Fu, Zening
    Sui, Jing
    Turner, Jessica A.
    Du, Yuhui
    Assaf, Michal
    Pearlson, Godfrey D.
    Calhoun, Vince D.
    [J]. HUMAN BRAIN MAPPING, 2021, 42 (01) : 80 - 94
  • [32] The Dynamic Functional Network Connectivity Analysis Framework
    Fu, Zening
    Du, Yuhui
    Calhoun, Vince D.
    [J]. ENGINEERING, 2019, 5 (02) : 190 - 193
  • [33] Default Mode network aberrant connectivity associated with neurological soft signs in schizophrenia Patients and Unaffected relatives
    Galindo, Liliana
    Berge, Daniel
    Murray, Graham K.
    Mane, Anna
    Bulbena, Antonio
    Perez, Victor
    Vilarroya, Oscar
    [J]. FRONTIERS IN PSYCHIATRY, 2018, 8
  • [34] Aberrant "default mode" functional connectivity in schizophrenia
    Garrity, Abigail G.
    Pearlson, Godfrey D.
    McKiernan, Kristen
    Lloyd, Dan
    Kiehl, Kent A.
    Calhoun, Vince D.
    [J]. AMERICAN JOURNAL OF PSYCHIATRY, 2007, 164 (03) : 450 - 457
  • [35] A multimodal magnetoencephalography 7 T fMRI and 7 T proton MR spectroscopy study in first episode psychosis
    Gawne, Timothy J.
    Overbeek, Gregory J.
    Killen, Jeffery F.
    Reid, Meredith A.
    Kraguljac, Nina V.
    Denney, Thomas S.
    Ellis, Charles A.
    Lahti, Adrienne C.
    [J]. NPJ SCHIZOPHRENIA, 2020, 6 (01):
  • [36] Ghosh S, 2013, INT J ADV COMPUT SC, V4, P35
  • [37] github, 2022, Scikit-fuzzy
  • [38] Anatomical Distance Affects Functional Connectivity in Patients With Schizophrenia and Their Siblings
    Guo, Shuixia
    Palaniyappan, Lena
    Yang, Bo
    Liu, Zhening
    Xue, Zhimin
    Feng, Jianfeng
    [J]. SCHIZOPHRENIA BULLETIN, 2014, 40 (02) : 449 - 459
  • [39] Salience-Default Mode Functional Network Connectivity Linked to Positive and Negative Symptoms of Schizophrenia
    Hare, Stephanie M.
    Ford, Judith M.
    Mathalon, Daniel H.
    Damaraju, Eswar
    Bustillo, Juan
    Belger, Aysenil
    Lee, Hyo Jong
    Mueller, Bryon A.
    Lim, Kelvin O.
    Brown, Gregory G.
    Preda, Adrian
    van Erp, Theo G. M.
    Potkin, Steven G.
    Calhoun, Vince D.
    Turner, Jessica A.
    [J]. SCHIZOPHRENIA BULLETIN, 2019, 45 (04) : 892 - 901
  • [40] A new entropy-based approach for fuzzy c-means clustering and its application to brain MR image segmentation
    Kahali, Sayan
    Sing, Jamuna Kanta
    Saha, Punam Kumar
    [J]. SOFT COMPUTING, 2019, 23 (20) : 10407 - 10414