Molecular and Phylogenetic Analysis of HIV-1 Subtype C in Bahia State, Northeastern Brazil

被引:0
作者
Oliveira, Rodrigo Cunha [1 ]
de Souza, Juliana Sacramento Mota [1 ]
Alcantara, Luiz Carlos Junior [2 ]
Guimaraes, Monick Lindenmeyer [3 ]
Brites, Carlos [4 ]
Monteiro-Cunha, Joana Paixao [1 ,5 ]
机构
[1] Univ Fed Bahia, Dept Bioquim & Biofis, Nucleo Bioinformat, Salvador, Brazil
[2] Inst Oswaldo Cruz FIOCRUZ, Lab Flavivirus, Rio De Janeiro, Brazil
[3] Inst Oswaldo Cruz FIOCRUZ, Lab AIDS & Imunol Mol, Rio De Janeiro, Brazil
[4] Univ Fed Bahia, Lab Pesquisa Infectol, Complexo Hosp Prof Edgard Santos, Salvador, Brazil
[5] Univ Fed Bahia, Dept Bioquim & Biofis, Nucleo Bioinformat, Ave Reitor Miguel Calmon S-N, BR-40110902 Salvador, Brazil
关键词
HIV-1; subtype C; Northeast; Brazil; Bahia state;
D O I
10.1089/aid.2023.0038
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
HIV-1 subtype C is associated with more than half of infections in southern Brazil and has been increasing in other regions of the country. In a previous study carried out in northeastern Brazil, we found a prevalence of 4.1% of subtype C. This work investigates the origin of subtype C in the state of Bahia based on five new viral sequences. The phylogenetic analysis showed that subtype C viruses found in Bahia descend from the main lineage that circulates in other Brazilian regions.
引用
收藏
页码:37 / 41
页数:5
相关论文
共 50 条
  • [31] Molecular phylogenetic analysis of HIV-1 vif gene from Korean isolates
    Park, Chan Seung
    Kim, Mi Sook
    Lee, Sung Duk
    Kim, Sung Soo
    Lee, Keon Myung
    Lee, Chan-Hee
    JOURNAL OF MICROBIOLOGY, 2006, 44 (06) : 655 - 659
  • [32] Phylogenetic Characterization of HIV-1 Sub-Subtype A1 in Karachi, Pakistan
    Tariq, Uroosa
    Nazziwa, Jamirah
    Sasinovich, Sviataslau
    Shah, Sharaf Ali
    Naeem, Sadaf
    Abidi, Syed Hani
    Esbjornsson, Joakim
    VIRUSES-BASEL, 2022, 14 (10):
  • [33] Molecular dynamics and ligand docking of a hinge region variant of South African HIV-1 subtype C protease
    Zondagh, Jake
    Balakrishnan, Vijayakumar
    Achilonu, Ikechukwu
    Dirr, Heini W.
    Sayed, Yasien
    JOURNAL OF MOLECULAR GRAPHICS & MODELLING, 2018, 82 : 1 - 11
  • [34] Development of a candidate DNA/MVA HIV-1 subtype C vaccine for India
    Kumar, S
    Aggarwal, P
    Vajpayee, M
    Pandey, RM
    Seth, P
    VACCINE, 2006, 24 (14) : 2585 - 2593
  • [35] HIV-1 Subtype C, Tenofovir, and the Relationship With Treatment Failure and Drug Resistance
    Gunthard, Huldrych F.
    Scherrer, Alexandra U.
    JOURNAL OF INFECTIOUS DISEASES, 2016, 214 (09) : 1289 - 1291
  • [36] Molecular Epidemiology of HIV-1 Subtype G in the Russian Federation
    Murzakova, Anastasia
    Kireev, Dmitry
    Baryshev, Pavel
    Lopatukhin, Alexey
    Serova, Ekaterina
    Shemshura, Andrey
    Saukhat, Sergey
    Kolpakov, Dmitry
    Matuzkova, Anna
    Suladze, Alexander
    Nosik, Marina
    Eremin, Vladimir
    Shipulin, German
    Pokrovsky, Vadim
    VIRUSES-BASEL, 2019, 11 (04): : 1 - 13
  • [37] Functional characteristics of HIV-1 subtype C compatible with increased heterosexual transmissibility
    Walter, Brandon L.
    Armitage, Andrew E.
    Graham, Stephen C.
    de Oliveira, Tulio
    Skinhoj, Peter
    Jones, E. Yvonne
    Stuart, David I.
    McMichael, Andrew J.
    Chesebro, Bruce
    Iversen, Astrid K. N.
    AIDS, 2009, 23 (09) : 1047 - 1057
  • [38] Structural Implications of HIV-1 Protease Subtype C Bound to Darunavir: A Molecular Dynamics Study
    Venkatachalam, Sankaran
    Krishnan, Sowmya Ramaswamy
    Pandian, Ramesh
    Sayed, Yasien
    Gromiha, M. Michael
    PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2025,
  • [39] Molecular Epidemiology of HIV-1 Virus in Puerto Rico: Novel Cases of HIV-1 Subtype C, D, and CRF-24BG
    Lopez, Pablo
    De Jesus, Omayra
    Yamamura, Yasuhiro
    Rodriguez, Nayra
    Arias, Andrea
    Sanchez, Raphael
    Rodriguez, Yadira
    Tamayo-Agrait, Vivian
    Cuevas, Wilfredo
    Rivera-Amill, Vanessa
    AIDS RESEARCH AND HUMAN RETROVIRUSES, 2018, 34 (06) : 507 - 516
  • [40] First case of HIV-1 subtype C infection in Mexico
    Guadalupe Rivera-Morales, Lydia
    Eloise Luna-Cruz, Itza
    Ramos-Alfano, Gerardo
    Geovanni Rosas-Taraco, Adrian
    Ramos-Jimenez, Javier
    del Carmen Palacios-Saucedo, Gerardo
    Manuel Vazquez-Guillen, Jose
    Armides Franco-Molina, Moises
    Tamez-Guerra, Reyes
    Rodriguez-Padilla, Cristina
    GACETA MEDICA DE MEXICO, 2011, 147 (05): : 424 - 428