Characterization of a novel polyextremotolerant fungus, Exophiala viscosa, with insights into its melanin regulation and ecological niche

被引:9
作者
Carr, Erin C. [1 ,7 ]
Barton, Quin [1 ]
Grambo, Sarah [2 ]
Sullivan, Mitchell [1 ]
Renfro, Cecile M. [3 ]
Kuo, Alan [4 ]
Pangilinan, Jasmyn [4 ]
Lipzen, Anna [4 ]
Keymanesh, Keykhosrow [4 ]
Savage, Emily [4 ]
Barry, Kerrie [4 ]
Grigoriev, Igor, V [4 ,5 ]
Riekhof, Wayne R. [1 ]
Harris, Steven D. [6 ,8 ]
机构
[1] Univ Nebraska Lincoln, Sch Biol Sci, Lincoln, NE 68588 USA
[2] Iowa State Univ, Roy J Carver Dept Biochem Biophys & Mol Biol, Ames, IA 50011 USA
[3] Univ Nebraska Lincoln, Dept Agron & Hort, Lincoln, NE 68588 USA
[4] Lawrence Berkeley Natl Lab, US Dept Energy Joint Genome Inst, Berkeley, CA 94720 USA
[5] Univ Calif Berkeley, Dept Plant & Microbial Biol, Berkeley, CA 94720 USA
[6] Iowa State Univ, Dept Plant Pathol Entomol & Microbiol, Ames, IA 50011 USA
[7] Univ Nebraska Lincoln, Sch Biol Sci, 1901 Vine St, Room E136, Lincoln, NE 68503 USA
[8] Iowa State Univ, Dept Plant Pathol Entomol & Microbiol, 2213 Pammel Dr, Adv Teaching & Res Bldg Room 1344c, Ames, IA 50011 USA
基金
美国国家科学基金会; 美国国家航空航天局;
关键词
polyextremotolerant fungi; black yeast fungi; melanin; Exophiala; biological soil crusts; microbial ecology; fungi; BIOLOGICAL SOIL CRUSTS; MULTIPLE SEQUENCE ALIGNMENT; BLACK YEAST; DERMATITIDIS; DIVERSITY; NITROGEN; GENOMES; MODEL; EVOLUTION; BACTERIA;
D O I
10.1093/g3journal/jkad110
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Black yeasts are polyextremotolerant fungi that contain high amounts of melanin in their cell wall and maintain a primar yeast form. These fungi grow in xeric, nutrient depletes environments which implies that they require highly flexible metabolisms and have been suggested to contain the ability to form lichen-like mutualisms with nearby algae and bacteria. However, the exact ecological niche and interactions between these fungi and their surrounding community are not well understood. We have isolated 2 novel black yeasts from the genus Exophiala that were recovered from dryland biological soil crusts. Despite notable differences in colony and cellular morphology, both fungi appear to be members of the same species, which has been named Exophiala viscosa (i.e. E. viscosa JF 03-3 Goopy and E. viscosa JF 03-4F Slimy). A combination of whole genome sequencing, phenotypic experiments, and melanin regulation experiments have been performed on these isolates to fully characterize these fungi and help decipher their fundamental niche within the biological soil crust consortium. Our results reveal that E. viscosa is capable of utilizing a wide variety of carbon and nitrogen sources potentially derived from symbiotic microbes, can withstand many forms of abiotic stresses, and excretes melanin which can potentially provide ultraviolet resistance to the biological soil crust community. Besides the identification of a novel species within the genus Exophiala, our study also provides new insight into the regulation of melanin production in polyextremotolerant fungi.
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页数:37
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