Microfluidic E-tongue to diagnose bovine mastitis with milk samples using Machine learning with Decision Tree models

被引:14
作者
Coatrini-Soares, Andrey [1 ]
Coatrini-Soares, Juliana [2 ]
Neto, Mario Popolin [3 ,4 ]
de Mello, Suelen Scarpa [5 ]
Pinto, Danielle Dos Santos Cinelli [6 ,9 ]
Carvalho, Wanessa Araujo [6 ]
Gilmore, Michael S. [5 ]
Piazzetta, Maria Helena Oliveira [7 ]
Gobbi, Angelo Luiz [7 ]
Branda, Humberto de Mello [6 ,9 ]
Paulovich, Fernando Vieira [3 ,8 ]
Oliveira Jr, Osvaldo N. [2 ]
Mattoso, Luiz Henrique Capparelli [1 ]
机构
[1] Embrapa Instrumentacao, Nanotechnol Natl Lab Agr LNNA, BR-13560970 Sao Carlos, Brazil
[2] Univ Sao Paulo, Sao Carlos Inst Phys IFSC, BR-13566590 Sao Carlos, Brazil
[3] Univ Sao Paulo, Inst Math & Comp Sci ICMC, BR-13566590 Sao Carlos, Brazil
[4] Fed Inst Sao Paulo IFSP, BR-14804296 Araraquara, Brazil
[5] Harvard Med Sch, Massachusetts Eye & Ear, Boston, MA 02114 USA
[6] Embrapa Gado Leite, BR-36038330 Juiz De Fora, Brazil
[7] Brazilian Ctr Res Energy & Mat, Brazilian Nanotechnol Natl Lab, BR-13083100 Campinas, Brazil
[8] Dalhousie Univ DAL, Fac Comp Sci FCS, Halifax, NS B3H 4R2, Canada
[9] Fed Univ Lavras UFLA, Programa Posgrad Ciencias Vet, BR-37200900 Lavras, Brazil
基金
巴西圣保罗研究基金会;
关键词
Mastitis; S; aureus; Electronic tongue; Sensors; Impedance spectroscopy; Machine learning; Multidimensional calibration space; STAPHYLOCOCCUS-AUREUS; ELECTRONIC TONGUE; IDENTIFICATION; SENSOR; ARCHITECTURES; PATHOGENS; BACTERIA; SYSTEM; TIME;
D O I
10.1016/j.cej.2022.138523
中图分类号
X [环境科学、安全科学];
学科分类号
08 ; 0830 ;
摘要
We report an electronic tongue based on impedance spectroscopy to detect Staphylococcus aureus and diagnose bovine mastitis in milk samples. This was achieved with optimized sensing units made with layer-by-layer films and by treating the capacitance data with machine learning algorithms employing decision trees models. These films were made with chitosan, chondroitin sulfate, sericin and gold nanoparticles /sericin, whose molecular -level interaction with S.aureus depended on the architecture according to PM-IRRAS measurements. The limit of detection in blank milk varied from 3.41 to 2.01 CFU/mL depending on the sensing unit. This sensitivity was complemented with the selectivity provided by combining the electrical responses of the four sensing units. Indeed, with machine learning it was possible to determine multidimensional calibration spaces (MCS) that could generate rules to explain how the milk samples could be discriminated. With a 7-dimension MCS, distinct S. aureus concentrations could be distinguished from possible interferents with a 100 % accuracy. In crude milk samples, 94 % accuracy was obtained with a 6-dimension MCS in multiclass classification for milk from different udders of a mastitis infected cow, including samples diluted 50-fold, in addition to milk from an infected cow treated with Bronopol and from a healthy cow. It is significant that in a ternary classification with these crude milk samples, a 2-dimension MCS could distinguish between milk from an infected cow, treated with Bronopol and from a healthy cow with 100 % accuracy. The combination of electronic tongues and machine learning - as in this proof-of-concept study -is promising for diagnosis of mastitis at a low cost.
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页数:9
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