Strategies to improve genome editing efficiency in crop plants

被引：4

作者：

Aravind, B. ^{[1
]}

Molla, Kutubuddin ^{[2
]}

Mangrauthia, Satendra K. ^{[3
]}

Mohannath, Gireesha ^{[1
]}

机构：

[1] Birla Inst Technol & Sci, Dept Biol Sci, Hyderabad Campus, Hyderabad 500078, Telangana, India

[2] ICAR Natl Rice Res Inst, Cuttack 753006, Odisha, India

[3] ICAR Indian Inst Rice Res, Hyderabad 500030, Telangana, India

来源：

JOURNAL OF PLANT BIOCHEMISTRY AND BIOTECHNOLOGY | 2023年 / 32卷 / 04期

关键词：

Genome editing; CRISPR-Cas; Transgene-free; Viral vectors; Histone deacetylase inhibitors; TRBO vector; DOUBLE-STRANDED DNA; TARGETED MUTAGENESIS; MOSAIC-VIRUS; HISTONE ACETYLATION; GENE REPAIR; CAS9; OVEREXPRESSION; AGROBACTERIUM; REPLICATION; CRISPR/CAS9;

D O I：

10.1007/s13562-023-00860-2

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

Genome editing technology comprises site-directed mutagenesis of genomes, involving alterations of few bases to precise replacement of a fragment or an entire gene sequence. Among multiple types of genome editing technologies developed, CRISPR-Cas9 and its latest variants have been revolutionizing the field of genetic engineering and plant biotechnology. Despite several advantages the CRISPR-Cas9 technology offers, it often suffers from low efficiency in creating desirable mutants in several crop plant species. In this review, we discuss various emerging strategies to improve genome editing efficiency in crop plants. The strategies include increased expression of genome editing components using high efficiency viral vectors, employment of inhibitors of chromatin modifiers, and using plant DNA viruses as donor DNA carriers. Additionally, we also discuss strategies to obtain transgene-free genome edited crops.

引用

页码：661 / 672

页数：12

共 101 条

[11] Geminivirus-Mediated Genome Editing in Potato (Solanum tuberosum L.) Using Sequence-Specific Nucleases [J].

Butler, Nathaniel M. ;

Baltes, Nicholas J. ;

Voytas, Daniel F. ;

Douches, David S. .

FRONTIERS IN PLANT SCIENCE, 2016, 7

[12] High-frequency, precise modification of the tomato genome [J].

Cermak, Tomas ;

Baltes, Nicholas J. ;

Cegan, Radim ;

Zhang, Yong ;

Voytas, Daniel F. .

GENOME BIOLOGY, 2015, 16

[13] Decorating chromatin for enhanced genome editing using CRISPR-Cas9 [J].

Chen, Evelyn ;

Lin-Shiao, Enrique ;

Trinidad, Marena ;

Doost, Mohammad Saffari ;

Colognori, David ;

Doudna, Jennifer A. .

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2022, 119 (49)

[14] The Chromatin Structure Differentially Impacts High-Specificity CRISPR-Cas9 Nuclease Strategies [J].

Chen, Xiaoyu ;

Liu, Jin ;

Janssen, Josephine M. ;

Goncalves, Manuel A. F. V. .

MOLECULAR THERAPY-NUCLEIC ACIDS, 2017, 8 :558-563

[15] Overexpression of human NOX1 complex induces genome instability in mammalian cells [J].

Chiera, Federica ;

Meccia, Ettore ;

Degan, Paolo ;

Aquilina, Gabriele ;

Pietraforte, Donatella ;

Minetti, Maurizio ;

Lambeth, David ;

Bignami, Margherita .

FREE RADICAL BIOLOGY AND MEDICINE, 2008, 44 (03) :332-342

[16] Maintenance of genome integrity and active homologous recombination in embryonic stem cells [J].

Choi, Eui-Hwan ;

Yoon, Seobin ;

Koh, Young Eun ;

Seo, Young-Jin ;

Kim, Keun Pil .

EXPERIMENTAL AND MOLECULAR MEDICINE, 2020, 52 (08) :1220-1229

[17] TSA Promotes CRISPR/Cas9 Editing Efficiency and Expression of Cell Division-Related Genes from Plant Protoplasts [J].

Choi, Seung Hee ;

Lee, Myoung Hui ;

Jin, Da Mon ;

Ju, Su Ji ;

Ahn, Woo Seok ;

Jie, Eun Yee ;

Lee, Ji Min ;

Lee, Jiyoung ;

Kim, Cha Young ;

Kim, Suk Weon .

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2021, 22 (15)

[18] Multiplexed Gene Editing and Protein Overexpression Using a Tobacco mosaic virus Viral Vector [J].

Cody, Will B. ;

Scholthof, Herman B. ;

Mirkov, T. Erik .

PLANT PHYSIOLOGY, 2017, 175 (01) :23-35

[19] Multiplex Genome Engineering Using CRISPR/Cas Systems [J].

Cong, Le ;

Ran, F. Ann ;

Cox, David ;

Lin, Shuailiang ;

Barretto, Robert ;

Habib, Naomi ;

Hsu, Patrick D. ;

Wu, Xuebing ;

Jiang, Wenyan ;

Marraffini, Luciano A. ;

Zhang, Feng .

SCIENCE, 2013, 339 (6121) :819-823

[20] The temperature optima of enzymes: a new perspective on an old phenomenon [J].

Daniel, RM ;

Danson, MJ ;

Eisenthal, R .

TRENDS IN BIOCHEMICAL SCIENCES, 2001, 26 (04) :223-225

← 1 2 3 4 5 6 7 8 9 10 →