A systematic pan-cancer analysis reveals the clinical prognosis and immunotherapy value of C-X3-C motif ligand 1 (CX3CL1)

被引:1
作者
Sun, Yidi [1 ]
机构
[1] Hainan Univ, Sch Biomed Engn, Haikou, Hainan, Peoples R China
基金
英国科研创新办公室;
关键词
chemokines; CX3CL1; pan-cancer; prognosis; immune infiltration; MEMBRANE-BOUND CHEMOKINE; NATURAL-KILLER-CELLS; FRACTALKINE RECEPTOR; DENDRITIC CELLS; HIGH EXPRESSION; CROSS-TALK; T-CELLS; CARCINOMA; NEUROBLASTOMA; MACROPHAGE;
D O I
10.3389/fgene.2023.1183795
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
It is now widely known that C-X3-C motif ligand 1 (CX3CL1) plays an essential part in the process of regulating pro-inflammatory cells migration across a wide range of inflammatory disorders, including a number of malignancies. However, there has been no comprehensive study on the correlation between CX3CL1 and cancers on the basis of clinical features. In order to investigate the potential function of CX3CL1 in the clinical prognosis and immunotherapy, I evaluated the expression of CX3CL1 in numerous cancer types, methylation levels and genetic alterations. I found CX3CL1 was differentially expressed in numerous cancer types, which indicated CX3CL1 may plays a potential role in tumor progression. Furthermore, CX3CL1 was variably expressed in methylation levels and gene alterations in most cancers according to The Cancer Genome Atlas (TCGA). CX3CL1 was robustly associated with clinical characteristics and pathological stages, suggesting that it was related to the degree of tumor malignancy and the physical function of patients. As determined by the Kaplan-Meier method of estimating survival, high CX3CL1 expression was associated with either favorable or unfavorable outcomes depending on the different types of cancer. It suggests the correlation between CX3CL1 and tumor prognosis. Significant positive correlations of CX3CL1 expression with CD4(+) T cells, M1 macrophage cells and activated mast cells have been established in the majority of TCGA malignancies. Which indicates CX3CL1 plays an important role in tumor immune microenvironment. Gene Ontology (GO) terms and the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis suggested that the chemokine signaling pathway may shed light on the pathway for CX3CL1 to exert function. In a conclusion, our study comprehensively summarizes the potential role of CX3CL1 in clinical prognosis and immunotherapy, suggesting that CX3CL1 may represent a promising pharmacological treatment target of tumors.
引用
收藏
页数:13
相关论文
共 89 条
[31]   Fractalkine Upregulates Inflammation through CX3CR1 and the Jak-Stat Pathway in Severe Acute Pancreatitis Rat Model [J].
Huang, Li-ya ;
Chen, Ping ;
Xu, Ling-xiao ;
Zhou, Yu-fen ;
Zhang, Yong-ping ;
Yuan, Yao-zong .
INFLAMMATION, 2012, 35 (03) :1023-1030
[32]   A guide to chemokines and their receptors [J].
Hughes, Catherine E. ;
Nibbs, Robert J. B. .
FEBS JOURNAL, 2018, 285 (16) :2944-2971
[33]   Relevance of the CXCR4/CXCR7-CXCL12 axis and its effect in pathophysiological conditions [J].
Huynh, Christine ;
Dingemanse, Jasper ;
Schwabedissen, Henriette E. Meyer zu ;
Sidharta, Patricia N. .
PHARMACOLOGICAL RESEARCH, 2020, 161
[34]   Increased expression of Fractalkine is correlated with a better prognosis and an increased number of both CD8+ T cells and natural killer cells in gastric adenocarcinoma [J].
Hyakudomi, Miki ;
Matsubara, Takeshi ;
Hyakudomi, Ryoji ;
Yamamoto, Tetsu ;
Kinugasa, Shoichi ;
Yamanoi, Akira ;
Maruyama, Riruke ;
Tanaka, Tsuneo .
ANNALS OF SURGICAL ONCOLOGY, 2008, 15 (06) :1775-1782
[35]   Identification and molecular characterization of fractalkine receptor CX(3)CR1, which mediates both leukocyte migration and adhesion [J].
Imai, T ;
Hieshima, K ;
Haskell, C ;
Baba, M ;
Nagira, M ;
Nishimura, M ;
Kakizaki, M ;
Takagi, S ;
Nomiyama, H ;
Schall, TJ ;
Yoshie, O .
CELL, 1997, 91 (04) :521-530
[36]   KEGG: Kyoto Encyclopedia of Genes and Genomes [J].
Kanehisa, M ;
Goto, S .
NUCLEIC ACIDS RESEARCH, 2000, 28 (01) :27-30
[37]   Fractalkine/CX3CL1 in Neoplastic Processes [J].
Korbecki, Jan ;
Siminska, Donata ;
Kojder, Klaudyna ;
Grochans, Szymon ;
Gutowska, Izabela ;
Chlubek, Dariusz ;
Baranowska-Bosiacka, Irena .
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2020, 21 (10)
[38]   TIMER2.0 for analysis of tumor-infiltrating immune cells [J].
Li, Taiwen ;
Fu, Jingxin ;
Zeng, Zexian ;
Cohen, David ;
Li, Jing ;
Chen, Qianming ;
Li, Bo ;
Liu, X. Shirley .
NUCLEIC ACIDS RESEARCH, 2020, 48 (W1) :W509-W514
[39]   CX3CL1 involves in breast cancer metastasizing to the spine via the Src/FAK signaling pathway [J].
Liang, Yun ;
Yi, Lei ;
Liu, Peng ;
Jiang, Libo ;
Wang, Houlei ;
Hu, Annan ;
Sun, Chi ;
Dong, Jian .
JOURNAL OF CANCER, 2018, 9 (19) :3603-3612
[40]   Stromal Microenvironment Shapes the Intratumoral Architecture of Pancreatic Cancer [J].
Ligorio, Matteo ;
Sil, Srinjoy ;
Malagon-Lopez, Jose ;
Nieman, Linda T. ;
Misale, Sandra ;
Di Pilato, Mauro ;
Ebright, Richard Y. ;
Karabacak, Murat N. ;
Kulkarni, Anupriya S. ;
Liu, Ann ;
Jordan, Nicole Vincent ;
Franses, Joseph W. ;
Philipp, Julia ;
Kreuzer, Johannes ;
Desai, Niyati ;
Arora, Kshitij S. ;
Rajurkar, Mihir ;
Horwitz, Elad ;
Neyaz, Azfar ;
Tai, Eric ;
Magnus, Neelima Kc ;
Vo, Kevin D. ;
Yashaswini, Chittampalli N. ;
Marangoni, Francesco ;
Boukhali, Myriam ;
Fatherree, Jackson P. ;
Damon, Leah J. ;
Xega, Kristina ;
Desai, Rushil ;
Choz, Melissa ;
Bersani, Francesca ;
Langenbucher, Dam ;
Thapar, Vishal ;
Morris, Robert ;
Wellner, Ulrich F. ;
Schilling, Oliver ;
Lawrence, Michael S. ;
Liss, Andrew S. ;
Rivera, Miguel N. ;
Deshpande, Vikram ;
Benes, Cyril H. ;
Maheswaran, Shyamala ;
Haber, Daniel A. ;
Fernandez-Del-Castillo, Carlos ;
Ferrone, Cristina R. ;
Haas, Wilhelm ;
Aryee, Martin J. ;
Ting, David T. .
CELL, 2019, 178 (01) :160-+