Denoising of Geochemical Data using Deep Learning-Implications for Regional Surveys

Regional geochemical surveys generate large amounts of data that can be used for a number of purposes such as to guide mineral exploration. Modern surveys are typically designed to permit quantification of data uncertainty through data quality metrics by using quality assurance and quality control (QA/QC) methods. However, these metrics, such as data accuracy and precision, are obtained through the data generation phase. Consequently, it is unclear how residual uncertainty in geochemical data can be minimized (denoised). This is a limitation to propagating uncertainty through downstream activities, particularly through complex models, which can result from the usage of artificial intelligence-based methods. This study aims to develop a deep learning-based method to examine and quantify uncertainty contained in geochemical survey data. Specifically, we demonstrate that: (1) autoencoders can reduce or modulate geochemical data uncertainty; (2) a reduction in uncertainty is observable in the spatial domain as a decrease of the nugget; and (3) a clear data reconstruction regime of the autoencoder can be identified that is strongly associated with data denoising, as opposed to the removal of useful events in data, such as meaningful geochemical anomalies. Our method to post-hoc denoising of geochemical data using deep learning is simple, clear and consistent, with the amount of denoising guided by highly interpretable metrics and existing frameworks of scientific data quality. Consequently, variably denoised data, as well as the original data, could be fed into a single downstream workflow (e.g., mapping, general data analysis or mineral prospectivity mapping), and the differences in the outcome can be subsequently quantified to propagate data uncertainty.