Whole genome characterization of a multidrug-resistant hypervirulent Pasteurella multocida with a new drug-resistant plasmid

被引:4
作者
Li, Yajuan [1 ,2 ,3 ,7 ]
Xiao, Junfang [1 ,2 ]
Cai, Qiuxiang [4 ]
Chang, Yung-Fu [5 ]
Li, Ruoying [1 ,2 ,3 ]
He, Xudong [1 ,2 ]
Teng, Yutao [1 ,2 ,3 ]
Zhang, Hui [1 ,2 ,6 ]
Zhang, Xinheng [1 ,2 ,3 ,6 ,7 ]
Xie, Qingmei [1 ,2 ,3 ,6 ,7 ]
机构
[1] South China Agr Univ, Coll Anim Sci, Heyuan Branch, Guangdong Prov Lab Lingnan Modern Agr Sci & Techno, Guangzhou 510642, Peoples R China
[2] Guangdong Engn Res Ctr Vector Vaccine Anim Virus, Guangzhou 510642, Peoples R China
[3] South China Agr Univ, Coll Anim Sci, Guangdong Prov Key Lab Agroanim Genom & Mol Breedi, Guangzhou, Peoples R China
[4] South China Agr Univ, Coll Vet Med, Guangzhou 510642, Peoples R China
[5] Cornell Univ, Coll Vet Med, Ithaca, NY USA
[6] China Collaborat Innovat Ctr Poultry Dis Control &, Guangzhou 510642, Peoples R China
[7] South China Agr Univ, Zhongshan Innovat Ctr, Zhongshan 528400, Peoples R China
关键词
Pasteurella multocida; drug resistant; pathogenicity; genome annotation; plasmid; ANTIMICROBIAL RESISTANCE; FOWL CHOLERA; VIRULENCE; SEQUENCE; ISOLATE; BOVINE; GENES; SUSCEPTIBILITY; IDENTIFICATION; FLORFENICOL;
D O I
10.1016/j.psj.2023.102583
中图分类号
S8 [畜牧、 动物医学、狩猎、蚕、蜂];
学科分类号
0905 ;
摘要
Pasteurella multocida (P. multocida) is a zoonotic bacterium that can cause diseases in a variety of animals. It was divided into 5 serogroups, and serogroup A is mainly prevalent in avian hosts. We iso-lated a virulent and multidrug-resistant P. multocida strain from Guangdong duck liver and named it PMWSG-4 (GenBank accession no. CP077723.1). To understand the pathogenicity of this strain, the pathoge-nicity test was carried out with mice and ducks. The results showed that PMSWG-4 was highly pathogenic to ducks and mice, and the LD50 is 4.5 and 73 CFU, respec-tively. In order to study its genetic characteristics, patho-genicity, and relationship with the host, we performed a whole genome sequencing. The genome size of the isolated PMWSG-4 was 2.38 Mbp, with a G+C content of 40.3%, and coding 2,313 Coding DNA Sequence (CDS). The genome carries 162 potential virulence-associated genes, 32 different drug resistance phenotypes, 102 genes possi-bly involved in pathogen-host interaction, 2 gene island groups, and 4 prophages. In addition, we also found a new drug-resistant plasmid from strain PMWSG-4, named pXL001 (GenBank accession no. CP077724.1). After verified, the plasmid is a new plasmid carrying the floR florfenicol resistance gene. The whole genome is of great significance for further studying the pathogenesis and genetic characteristics of duck-derived P. multocida.
引用
收藏
页数:14
相关论文
共 66 条
[41]  
Raheem M. A., 2021, POULT SCI
[42]   Novel multi-strain probiotics reduces Pasteurella multocida induced fowl cholera mortality in broilers [J].
Reuben, Rine Christopher ;
Sarkar, Shovon Lal ;
Ibnat, Habiba ;
Setu, Md. Ali Ahasan ;
Roy, Pravas Chandra ;
Jahid, Iqbal Kabir .
SCIENTIFIC REPORTS, 2021, 11 (01)
[43]  
Sarangi Laxmi Narayan, 2014, ScientificWorldJournal, V2014, P814109, DOI 10.1155/2014/814109
[44]   Molecular basis of bacterial resistance to chloramphenicol and florfenicol [J].
Schwarz, S ;
Kehrenberg, C ;
Doublet, B ;
Cloeckaert, A .
FEMS MICROBIOLOGY REVIEWS, 2004, 28 (05) :519-542
[45]   Prokka: rapid prokaryotic genome annotation [J].
Seemann, Torsten .
BIOINFORMATICS, 2014, 30 (14) :2068-2069
[46]  
Shivachandra S. B., 2011, Animal Health Research Reviews, V12, P67, DOI 10.1017/S146625231100003X
[47]   Genetic characterization of a novel blaDIM-2-carrying megaplasmid p12969-DIM from clinical Pseudomonas putida [J].
Sun, Fengjun ;
Zhou, Dongsheng ;
Wang, Qian ;
Feng, Jiao ;
Feng, Wei ;
Luo, Wenbo ;
Liu, Yao ;
Qiu, Xuewen ;
Yin, Zhe ;
Xia, Peiyuan .
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY, 2016, 71 (04) :909-912
[48]   Isolation, Antimicrobial Resistance, and Virulence Genes of Pasteurella multocida Strains from Swine in China [J].
Tang, Xibiao ;
Zhao, Zhanqin ;
Hu, Junyong ;
Wu, Bin ;
Cai, Xuwang ;
He, Qigai ;
Chen, Huanchun .
JOURNAL OF CLINICAL MICROBIOLOGY, 2009, 47 (04) :951-958
[49]  
Tarailo-Graovac Maja, 2009, Curr Protoc Bioinformatics, VChapter 4, DOI 10.1002/0471250953.bi0410s25
[50]   Protection Against Fowl Cholera Conferred by Vaccination with Recombinant Pasteurella multocida Filamentous Hemagglutinin Peptides [J].
Tatum, Fred M. ;
Tabatabai, Louisa B. ;
Briggs, Robert E. .
AVIAN DISEASES, 2009, 53 (02) :169-174