Molecular and Biological Characterization of Novel and Known Family Secoviridae Members Infecting Lettuce

被引:0
作者
Svanella-Dumas, Laurence [1 ]
Tsarmpopoulos, Iason [1 ]
Marais, Armelle [1 ]
Faure, Chantal [1 ]
Theil, Sebastien [1 ,7 ]
Glasa, Miroslav [2 ]
Predajna, Lukas [2 ]
Gaudin, Jonathan [3 ]
Tian, Sixing [4 ]
Porcher, Laetitia [4 ]
Gentit, Pascal [4 ]
De Oliveira, Milena Leite [5 ]
Krause-Sakate, Renate [6 ]
Candresse, Thierry [1 ]
机构
[1] Univ Bordeaux, INRAE, UMR Biol Fruit & Pathol, CS20032, F-33882 Villenave Dornon, France
[2] Slovak Acad Sci, Inst Virol, Biomed Res Ctr, Dubravska Cesta 9, Bratislava 84505, Slovakia
[3] INRAE, Bordeaux Sci Agro, UMR Sante & Agroecol Vignoble, CS20032, F-33882 Villenave Dornon, France
[4] ANSES, Plant Hlth Lab, Unite Bacteriol Virol & Detect OGM, 7 Rue Jean Dixmeras, F-49044 Angers 01, France
[5] Sao Paulo State Univ UNESP, Sch Agr, Lab Cent Multisuarios LACEM, Fac Ciencias Agron, Botucatu, SP, Brazil
[6] Sao Paulo State Univ UNESP, Sch Agr, Dept Plant Protect, Fac Ciencias Agron, Botucatu, SP, Brazil
[7] Univ Clermont Auvergne, Fromage UMR545, INRAE, VetAgro Sup, 20 Cote Reyne, F-15000 Aurillac, France
关键词
Brazil; etiology; France; high-throughput sequencing; lettuce; lettuce mottle virus; PARSNIP-YELLOW-FLECK; TUNGRO-SPHERICAL-VIRUS; NUCLEOTIDE-SEQUENCE; TAXONOMY; IDENTIFICATION; DIVERSITY; DISEASES; GENERA; AREAS;
D O I
10.1094/PHYTO-03-23-0095-R
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
High-throughput sequencing of two lettuces showing virus-like symptoms in France provided evidence of infection by members of the family Secoviridae. One plant (JG1) had a complex mixed infection that involved, among others, a novel waikavirus (lettuce waikavirus 1) and two isolates of a sequivirus related to lettuce mottle virus (LeMoV). The second lettuce plant (JG2) was singly infected by LeMoV. Complete genomic sequences were obtained for all four isolates and, in addition, near complete genome sequences were obtained for other LeMoV or LeMoV-related isolates (from French cultivated and wild lettuces and from a Brazilian cultivated lettuce) and for two isolates of another family Asteraceae-infecting sequivirus, dandelion yellow mosaic virus (DaYMV). Analysis of these genomic sequences allows the proposal of tentative genome organization for the various viruses and clarification of their phylogenetic relationships. Sequence and host range comparisons point to significant differences between the two sequivirus isolates identified in the JG1 plant and LeMoV isolates from France and Brazil, suggesting they belong to a novel species for which the name lettuce star mosaic virus is proposed.
引用
收藏
页码:1595 / 1604
页数:10
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