Transcription-translation coupling: Recent advances and future perspectives

被引:10
作者
Woodgate, Jason [1 ,2 ]
Zenkin, Nikolay [1 ]
机构
[1] Newcastle Univ, Biosci Inst, Fac Med Sci, Ctr Bacterial Cell Biol, Newcastle Upon Tyne, England
[2] Newcastle Univ, Biosci Inst, Fac Med Sci, Ctr Bacterial Cell Biol, Baddiley Clark Bldg,Richardson Rd, Newcastle Upon Tyne NE2 4AX, England
基金
英国惠康基金; 英国生物技术与生命科学研究理事会;
关键词
bacterial gene expression; coupling of transcription and translation; CryoEM; expressome; molecular machines; transcription; translation; RNA CHAIN ELONGATION; TERMINATION FACTOR; STRUCTURAL BASIS; POLYMERASE; EXPRESSION; RHO; ARCHITECTURE; ATTENUATION; MECHANISM; FIDELITY;
D O I
10.1111/mmi.15076
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The flow of genetic information from the chromosome to protein in all living organisms consists of two steps: (1) copying information coded in DNA into an mRNA intermediate via transcription by RNA polymerase, followed by (2) translation of this mRNA into a polypeptide by the ribosome. Unlike eukaryotes, where transcription and translation are separated by a nuclear envelope, in bacterial cells, these two processes occur within the same compartment. This means that a pioneering ribosome starts translation on nascent mRNA that is still being actively transcribed by RNA polymerase. This tethering via mRNA is referred to as 'coupling' of transcription and translation (CTT). CTT raises many questions regarding physical interactions and potential mutual regulation between these large (ribosome is similar to 2.5 MDa and RNA polymerase is 0.5 MDa) and powerful molecular machines. Accordingly, we will discuss some recently discovered structural and functional aspects of CTT.
引用
收藏
页码:539 / 546
页数:8
相关论文
共 50 条
[1]   Structural Basis of Transcription: RNA Polymerase Backtracking and Its Reactivation [J].
Abdelkareem, Mo'men ;
Saint-Andre, Charlotte ;
Takacs, Maria ;
Papai, Gabor ;
Crucifix, Corinne ;
Guo, Xieyang ;
Ortiz, Julio ;
Weixlbaumer, Albert .
MOLECULAR CELL, 2019, 75 (02) :298-+
[2]   CONTROL OF TRANSCRIPTION TERMINATION [J].
ADHYA, S ;
GOTTESMAN, M .
ANNUAL REVIEW OF BIOCHEMISTRY, 1978, 47 :967-996
[3]   RECONSTITUTION OF BACILLUS-SUBTILIS TRP ATTENUATION INVITRO WITH TRAP, THE TRP RNA-BINDING ATTENUATION PROTEIN [J].
BABITZKE, P ;
YANOFSKY, C .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1993, 90 (01) :133-137
[4]   RfaH and the ops element, components of a novel system controlling bacterial transcription elongation [J].
Bailey, MJA ;
Hughes, C ;
Koronakis, V .
MOLECULAR MICROBIOLOGY, 1997, 26 (05) :845-851
[5]   A ratchet mechanism of transcription elongation and its control [J].
Bar-Nahum, G ;
Epshtein, V ;
Ruckenstein, AE ;
Rafikov, R ;
Mustaev, A ;
Nudler, E .
CELL, 2005, 120 (02) :183-193
[6]   Structural basis for converting a general transcription factor into an operon-specific virulence regulator [J].
Belogurov, Georgiy A. ;
Vassylyeva, Marina N. ;
Svetlov, Vladimir ;
Klyuyev, Sergiy ;
Grishin, Nick V. ;
Vassylyev, Dmitry G. ;
Artsimovitch, Irina .
MOLECULAR CELL, 2007, 26 (01) :117-129
[7]   The Mechanisms of Substrate Selection, Catalysis, and Translocation by the Elongating RNA Polymerase [J].
Belogurov, Georgiy A. ;
Artsimovitch, Irina .
JOURNAL OF MOLECULAR BIOLOGY, 2019, 431 (20) :3975-4006
[8]   An α Helix to β Barrel Domain Switch Transforms the Transcription Factor RfaH into a Translation Factor [J].
Burmann, Bjoern M. ;
Knauer, Stefan H. ;
Sevostyanova, Anastasia ;
Schweimer, Kristian ;
Mooney, Rachel A. ;
Landick, Robert ;
Artsimovitch, Irina ;
Roesch, Paul .
CELL, 2012, 150 (02) :291-303
[9]   A NusE:NusG Complex Links Transcription and Translation [J].
Burmann, Bjoern M. ;
Schweimer, Kristian ;
Luo, Xiao ;
Wahl, Markus C. ;
Stitt, Barbara L. ;
Gottesman, Max E. ;
Roesch, Paul .
SCIENCE, 2010, 328 (5977) :501-504
[10]   Methodology for the analysis of transcription and translation in transcription-coupled-to-translation systems in vitro [J].
Castro-Roa, Daniel ;
Zenkin, Nikolay .
METHODS, 2015, 86 :51-59