Mechanistic insights into the aggregation pathway of the patient-derived immunoglobulin light chain variable domain protein FOR005

被引:7
作者
Pradhan, Tejaswini [1 ,2 ]
Sarkar, Riddhiman [1 ,2 ]
Meighen-Berger, Kevin M. [3 ]
Feige, Matthias J. [3 ]
Zacharias, Martin [3 ]
Reif, Bernd [1 ,2 ]
机构
[1] Tech Univ Munich, Bavarian NMR Ctr BNMRZ, TUM Sch Nat Sci, Dept Biosci, Lichtenbergstr 4, D-85747 Garching, Germany
[2] Helmholtz Zentrum Munchen HMGU, Inst Struct Biol STB, Ingolstadter Landstr 1, D-85764 Neuherberg, Germany
[3] Tech Univ Munich, Ctr Funct Prot Assemblies CPA, TUM Sch Nat Sci, Dept Biosci, Ernst Otto Fischer Str 8, D-85748 Garching, Germany
关键词
AMYLOID FIBRILLATION; HYDROGEN-EXCHANGE; AMYLOIDOGENICITY; SPECTROSCOPY; EQUILIBRIUM; DEPENDENCE; DYNAMICS; FIBRILS; PHASE; PH;
D O I
10.1038/s41467-023-39280-0
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Using solution-state NMR spectroscopy, the authors followed the individual steps involved in protein misfolding from the native to the amyloid fibril state for the antibody light chain (AL) amyloidosis related protein FOR005. Systemic antibody light chain (AL) amyloidosis is characterized by deposition of amyloid fibrils. Prior to fibril formation, soluble oligomeric AL protein has a direct cytotoxic effect on cardiomyocytes. We focus on the patient derived & lambda;-III AL variable domain FOR005 which is mutated at five positions with respect to the closest germline protein. Using solution-state NMR spectroscopy, we follow the individual steps involved in protein misfolding from the native to the amyloid fibril state. Unfavorable mutations in the complementary determining regions introduce a strain in the native protein structure which yields partial unfolding. Driven by electrostatic interactions, the protein converts into a high molecular weight, oligomeric, molten globule. The high local concentration of aggregation prone regions in the oligomer finally catalyzes the conversion into fibrils. The topology is determined by balanced electrostatic interactions in the fibril core implying a 180 & DEG; rotational switch of the beta-sheets around the conserved disulfide bond.
引用
收藏
页数:14
相关论文
共 52 条
[1]   Common Fibril Structures Imply Systemically Conserved Protein Misfolding Pathways In Vivo [J].
Annamalai, Karthikeyan ;
Liberta, Falk ;
Vielberg, Marie-Theres ;
Close, William ;
Lilie, Hauke ;
Guehrs, Karl-Heinz ;
Schierhorn, Angelika ;
Koehler, Rolf ;
Schmidt, Andreas ;
Haupt, Christian ;
Hegenbart, Ute ;
Schoenland, Stefan ;
Schmidt, Matthias ;
Groll, Michael ;
Faendrich, Marcus .
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2017, 56 (26) :7510-7514
[2]   On the lag phase in amyloid fibril formation [J].
Arosio, Paolo ;
Knowles, Tuomas P. J. ;
Linse, Sara .
PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2015, 17 (12) :7606-7618
[3]   Altered dimer interface decreases stability in an amyloidogenic protein [J].
Baden, Elizabeth M. ;
Owen, Barbara A. L. ;
Peterson, Francis C. ;
Volkman, Brian F. ;
Ramirez-Alvarado, Marina ;
Thompson, James R. .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2008, 283 (23) :15853-15860
[4]   PRIMARY STRUCTURE EFFECTS ON PEPTIDE GROUP HYDROGEN-EXCHANGE [J].
BAI, YW ;
MILNE, JS ;
MAYNE, L ;
ENGLANDER, SW .
PROTEINS-STRUCTURE FUNCTION AND GENETICS, 1993, 17 (01) :75-86
[5]   Compositional Control of Phase-Separated Cellular Bodies [J].
Banani, Salman F. ;
Rice, Allyson M. ;
Peeples, William B. ;
Lin, Yuan ;
Jain, Saumya ;
Parker, Roy ;
Rosen, Michael K. .
CELL, 2016, 166 (03) :651-663
[6]   Differences in Protein Concentration Dependence for Nucleation and Elongation in Light Chain Amyloid Formation [J].
Blancas-Mejia, Luis M. ;
Misra, Pinaki ;
Ramirez-Alvarado, Marina .
BIOCHEMISTRY, 2017, 56 (05) :757-766
[7]   Recruitment of Light Chains by Homologous and Heterologous Fibrils Shows Distinctive Kinetic and Conformational Specificity [J].
Blancas-Mejia, Luis M. ;
Ramirez-Alvarado, Marina .
BIOCHEMISTRY, 2016, 55 (21) :2967-2978
[8]   Systemic Amyloidoses [J].
Blancas-Mejia, Luis M. ;
Ramirez-Alvarado, Marina .
ANNUAL REVIEW OF BIOCHEMISTRY, VOL 82, 2013, 82 :745-774
[9]   Inhibition by small-molecule ligands of formation of amyloid fibrils of an immunoglobulin light chain variable domain [J].
Brumshtein, Boris ;
Esswein, Shannon R. ;
Salwinski, Lukasz ;
Phillips, Martin L. ;
Ly, Alan T. ;
Cascio, Duilio ;
Sawaya, Michael R. ;
Eisenberg, David S. .
ELIFE, 2015, 4
[10]   Tafamidis, a potent and selective transthyretin kinetic stabilizer that inhibits the amyloid cascade [J].
Bulawa, Christine E. ;
Connelly, Stephen ;
DeVit, Michael ;
Wang, Lan ;
Weigel, Charlotte ;
Fleming, James A. ;
Packman, Jeff ;
Powers, Evan T. ;
Wiseman, R. Luke ;
Foss, Theodore R. ;
Wilson, Ian A. ;
Kelly, Jeffery W. ;
Labaudiniere, Richard .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2012, 109 (24) :9629-9634