Artificial neural network modeling on the polymer-electrolyte aqueous two-phase systems involving biomolecules

被引:14
作者
Chen, Yuqiu [1 ]
Liang, Xiaodong [1 ]
Kontogeorgis, Georgios M. [1 ]
机构
[1] Tech Univ Denmark, Dept Chem & Biochem Engn, DK-2800 Lyngby, Denmark
基金
欧盟地平线“2020”; 欧洲研究理事会;
关键词
Biomolecule separation and purification; Aqueous two-phase systems (ATPS); Modeling; Electrolytes; Artificial neural network; LIQUID-LIQUID EQUILIBRIUM; GLYCOL DIMETHYL ETHER; UNIFAC GROUP-CONTRIBUTION; POLYOXYETHYLENE LAURYL ETHER; DIFFERENT TEMPERATURES EXPERIMENT; DIPOTASSIUM HYDROGEN PHOSPHATE; ASSOCIATING FLUID THEORY; BOVINE SERUM-ALBUMIN; PLUS WATER-SYSTEMS; POLY(ETHYLENE GLYCOL);
D O I
10.1016/j.seppur.2022.122624
中图分类号
TQ [化学工业];
学科分类号
0817 ;
摘要
Polymer-electrolyte aqueous two-phase systems (ATPS) have demonstrated their superior performance in the separation and purification of high-value biomolecules. However, these powerful platforms are still a major academic curiosity, without their acceptance and implementation by industry. One of the major obstacles is the absence of models to predict the partition of biomolecules in ATPS in an easy and predictive way. To address this limitation, modelling studies on the binodal curve behavior of polymer-electrolyte ATPS and the partitioning of biomolecules in these aqueous electrolyte solutions are carried out in this work. First, a comprehensive database targeting the studied systems is established. In total, 11,998 experimental binodal data points covering 276 polymer-electrolyte ATPS at different temperatures (273.15 K-399.15 K) and 626 experimental partition data points involving 22 biomolecules in 42 polymer-electrolyte ATPS at different temperatures (283.15 K-333.15 K) are included. Then, a novel modeling strategy that combines a well-known machine learning algorithm, i.e., artificial neural network (ANN) and group contribution (GC) method is proposed. Based on this modeling strategy, an ANN-GC model (ANN-GC model1) is built to describe the binodal curve behavior of polymer-electrolyte ATPS, while another ANN-GC model (ANN-GC model2) is developed to predict the partition of biomolecules in these biphasic systems. ANN-GC model1 gives a mean absolute error (MAE) of 0.0132 and squared correlation coefficient (R-2) of 0.9878 for the 9,598 training data points, and for the 1,200 validation data points they are 0.0141 and 0.9858, respectively. Meanwhile, it also gives a MAE of 0.0143 and R-2 of 0.9846 for the 1,200 test data points. On the other hand, ANN-GC model2 gives root-mean-square deviation (RMSD) of 0.0577 for 501 training data points, and for the 62 validation data points and 63 test data points their RMSD are 0.0849 and 0.0885, respectively. Furthermore, the obtained results also indicate that the tie-line length of polymer-electrolyte ATPS calculated from ANN-GC model1 can be directly used in ANN-GC model2 for predicting the partition performance coefficient of biomolecules in these ATPS. The developed models offer the possibility to predict the partition of biomolecules in ATPS without any requirement of experimental data. Based on the developed ANN-GC models, some high-performance ATPS are identified to partition four well-known biomolecules.
引用
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页数:15
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共 182 条
[1]   Measurement and Correlation of the Phase Equilibrium of Aqueous Two-Phase Systems Composed of Polyethylene(glycol) 1500 or 4000 + Sodium Sulfite plus Water at Different Temperatures [J].
Alvarenga, Bruno G. ;
Virtuoso, Luciano S. ;
Lemes, Nelson H. T. ;
da Silva, Luis A. ;
Mesquita, Anderson F. ;
Nascimento, Kelany S. ;
Hespanhol da Silva, Maria C. ;
Mendes da Silva, Luis H. .
JOURNAL OF CHEMICAL AND ENGINEERING DATA, 2014, 59 (02) :382-390
[2]   Liquid-liquid equilibrium of poly(ethylene glycol) 4000+diammonium hydrogen phosphate plus water at different temperatures [J].
Amaresh, Samuthira Pandian ;
Murugesan, Shreela ;
Regupathi, Iyyaswami ;
Murugesan, Thanapalan .
JOURNAL OF CHEMICAL AND ENGINEERING DATA, 2008, 53 (07) :1574-1578
[3]   The cloud point and the liquid-liquid equilibrium behaviors of L31\L61-K2CO3\C4H4O6K2 aqueous two-phase systems at different temperatures [J].
An, Baodong ;
Mao, Yanli ;
Zhang, Wenli ;
Han, Juan ;
Wang, Yun ;
Ni, Liang .
FLUID PHASE EQUILIBRIA, 2016, 425 :57-64
[4]   Temperature, Polymer Molecular Weight, and Salt Effects on Phase Equilibria of PVP plus Formate Salts plus Water: Experimental Measurements, Correlations, and Thermodynamic Modeling [J].
Arzideh, Seyyed Mohammad ;
Nateri, Maryam Shams ;
Pirdashti, Mohsen .
JOURNAL OF CHEMICAL AND ENGINEERING DATA, 2021, 66 (12) :4496-4507
[5]   Aqueous two-phase systems for protein separation: Phase separation and applications [J].
Asenjo, Juan A. ;
Andrews, Barbara A. .
JOURNAL OF CHROMATOGRAPHY A, 2012, 1238 :1-10
[6]   Influence of the molecular weight of polymer, temperature and pH on phase diagrams of poly (ethylene glycol) plus di-potassium tartrate aqueous two-phase systems [J].
Barani, Alireza ;
Pirdashti, Mohsen ;
Heidari, Zahra ;
Dragoi, Elena-Niculina .
FLUID PHASE EQUILIBRIA, 2018, 459 :1-9
[7]   Equilibrium Data and Physical Properties of Aqueous Two Phase Systems Formed by PEG (1500 and 4000) g.mol-1 + Sodium Sulfate plus Water at Different Temperatures and pH 2 [J].
Barbosa, Ada A. ;
Bonomo, Renata C. F. ;
Martins, Cristiane V. ;
Fontan, Rafael C. I. ;
Souza Junior, Evaldo C. ;
Minim, Luis A. ;
Pignata, Michelle C. .
JOURNAL OF CHEMICAL AND ENGINEERING DATA, 2016, 61 (01) :3-11
[8]   Aqueous two-phase system of poly(ethylene glycol) 4000 and sodium molybdate at different temperatures [J].
Barrueto, Yahaira ;
Munoz, Katherine ;
Garnica, Katiuska ;
Villalobos, Islaman ;
Jimenez, Yecid P. .
FLUID PHASE EQUILIBRIA, 2015, 399 :66-73
[9]   Liquid-Liquid Equilibrium of Polymer-Inorganic Salt Aqueous Two-Phase Systems: Experimental Determination and Correlation [J].
Baskaran, Divya ;
Chinnappan, Karthikeyan ;
Manivasagan, Rajasimman ;
Selvaraj, Raja .
JOURNAL OF CHEMICAL AND ENGINEERING DATA, 2017, 62 (02) :738-743
[10]   CO2 capture by a task-specific ionic liquid [J].
Bates, ED ;
Mayton, RD ;
Ntai, I ;
Davis, JH .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2002, 124 (06) :926-927