Metatranscriptomic responses and microbial degradation of background polycyclic aromatic hydrocarbons in the coastal Mediterranean and Antarctica

被引:3
作者
Martinez-Varela, Alicia [1 ]
Casas, Gemma [1 ]
Berrojalbiz, Naiara [1 ]
Lundin, Daniel [2 ]
Pina, Benjamin [1 ]
Dachs, Jordi [1 ]
Vila-Costa, Maria [1 ]
机构
[1] CSIC, Dept Environm Chem, Inst Environm Assessment & Water Res, IDAEA, C-Jordi Girona 18-26, Barcelona 08034, Catalunya, Spain
[2] Linnaeus Univ, Ctr Ecol & Evolut Microbial Model Syst, EEMiS, S-35195 Kalmar, Sweden
关键词
Polycyclic aromatic hydrocarbons (PAH); Metatranscriptomics; 16S amplicon sequencing; PAH biodegradation rates; Antarctica; Mediterranean; MOBILE GENETIC ELEMENTS; HORIZON OIL-SPILL; DEGRADING BACTERIA; MARINE BACTERIOPLANKTON; COMMUNITY RESPONSE; BIODEGRADATION; METAGENOME; ALIGNMENT; REVEALS; BUDGET;
D O I
10.1007/s11356-023-30650-1
中图分类号
X [环境科学、安全科学];
学科分类号
08 ; 0830 ;
摘要
Although microbial degradation is a key sink of polycyclic aromatic hydrocarbons (PAH) in surface seawaters, there is a dearth of field-based evidences of regional divergences in biodegradation and the effects of PAHs on site-specific microbial communities. We compared the magnitude of PAH degradation and its impacts in short-term incubations of coastal Mediterranean and the Maritime Antarctica microbiomes with environmentally relevant concentrations of PAHs. Mediterranean bacteria readily degraded the less hydrophobic PAHs, with rates averaging 4.72 +/- 0.5 ng L h-1. Metatranscriptomic responses showed significant enrichments of genes associated to horizontal gene transfer, stress response, and PAH degradation, mainly harbored by Alphaproteobacteria. Community composition changed and increased relative abundances of Bacteroidota and Flavobacteriales. In Antarctic waters, there was no degradation of PAH, and minimal metatranscriptome responses were observed. These results provide evidence for factors such as geographic region, community composition, and pre-exposure history to predict PAH biodegradation in seawater.
引用
收藏
页码:119988 / 119999
页数:12
相关论文
共 64 条
  • [1] [Anonymous], 1983, Methods of seawater analysis, DOI [DOI 10.1002/9783527613984, 10.1002/9783527613984.ch10, DOI 10.1002/9783527613984.CH10]
  • [2] A benzene-degrading nitrate-reducing microbial consortium displays aerobic and anaerobic benzene degradation pathways
    Atashgahi, Siavash
    Hornung, Bastian
    van der Waals, Marcelle J.
    da Rocha, Ulisses Nunes
    Hugenholtz, Floor
    Nijsse, Bart
    Molenaar, Douwe
    van Spanning, Rob
    Stams, Alfons J. M.
    Gerritse, Jan
    Smidt, Hauke
    [J]. SCIENTIFIC REPORTS, 2018, 8
  • [3] Biogeochemical and physical controls on concentrations of polycyclic aromatic hydrocarbons in water and plankton of the Mediterranean and Black Seas
    Berrojalbiz, Naiara
    Dachs, Jordi
    Jose Ojeda, Maria
    Carmen Valle, Maria
    Castro-Jimenez, Javier
    Wollgast, Jan
    Ghiani, Michela
    Hanke, Georg
    Zaldivar, Jose Manuel
    [J]. GLOBAL BIOGEOCHEMICAL CYCLES, 2011, 25
  • [4] Biodegradation of petroleum hydrocarbons in seawater at low temperatures (0-5 °C) and bacterial communities associated with degradation
    Brakstad, OG
    Bonaunet, K
    [J]. BIODEGRADATION, 2006, 17 (01) : 71 - 82
  • [5] Fast and sensitive protein alignment using DIAMOND
    Buchfink, Benjamin
    Xie, Chao
    Huson, Daniel H.
    [J]. NATURE METHODS, 2015, 12 (01) : 59 - 60
  • [6] Sources and fate of polycyclic aromatic hydrocarbons in the Antarctic and Southern Ocean atmosphere
    Cabrerizo, Ana
    Galban-Malagon, Cristobal
    Del Vento, Sabino
    Dachs, Jordi
    [J]. GLOBAL BIOGEOCHEMICAL CYCLES, 2014, 28 (12) : 1424 - 1436
  • [7] Callahan BJ, 2016, NAT METHODS, V13, P581, DOI [10.1038/NMETH.3869, 10.1038/nmeth.3869]
  • [8] Snow Amplification of Persistent Organic Pollutants at Coastal Antarctica
    Casal, Paulo
    Casas, Gemma
    Vila-Costa, Maria
    Cabrerizo, Ana
    Pizarro, Mariana
    Jimenez, Begona
    Dachs, Jordi
    [J]. ENVIRONMENTAL SCIENCE & TECHNOLOGY, 2019, 53 (15) : 8872 - 8882
  • [9] Pivotal Role of Snow Deposition and Melting Driving Fluxes of Polycyclic Aromatic Hydrocarbons at Coastal Livingston Island (Antarctica)
    Casal, Paulo
    Cabrerizo, Ana
    Vila-Costa, Maria
    Pizarro, Mariana
    Jimenez, Begona
    Dachs, Jordi
    [J]. ENVIRONMENTAL SCIENCE & TECHNOLOGY, 2018, 52 (21) : 12327 - 12337
  • [10] Rain Amplification of Persistent Organic Pollutants
    Casas, Gemma
    Martinez-Varela, Alicia
    Vila-Costa, Maria
    Jimenez, Begona
    Dachs, Jordi
    [J]. ENVIRONMENTAL SCIENCE & TECHNOLOGY, 2021, 55 (19) : 12961 - 12972