Long non-coding RNA LINC00460 contributes as a potential prognostic biomarker through its oncogenic role with ANXA2 in colorectal polyps

被引:4
|
作者
Hosseini, Farzaneh Alsadat [1 ]
Rejali, Leili [2 ]
Zabihi, Mohammad Reza [3 ]
Salehi, Zahra [4 ]
Daskar-Abkenar, Elahe [2 ]
Taraz, Tannaz [2 ]
Fatemi, Nayeralsadat [2 ]
Hashemi, Mehrdad [1 ,5 ]
Asadzadeh-Aghdaei, Hamid [2 ]
Nazemalhosseini-Mojarad, Ehsan [6 ]
机构
[1] Islamic Azad Univ, Fac Adv Sci & Technol, Dept Genet, Tehran Med Sci, Tehran, Iran
[2] Shahid Beheshti Univ Med Sci, Res Inst Gastroenterol & Liver Dis, Basic & Mol Epidemiol Gastrointestinal Disorders R, Tehran, Iran
[3] Univ Tehran Med Sci, Sch Med, Dept Immunol, Tehran, Iran
[4] Univ Tehran, Inst Biochem & Biophys IBB, Dept Bioinformat, Lab Complex Biol Syst & Bioinformat CBB, Tehran, Iran
[5] Islamic Azad Univ, Farhikhtegan Hosp, Farhikhtegan Med Convergence Sci Res Ctr, Tehran Med Sci, Tehran, Iran
[6] Shahid Beheshti Univ Med Sci, Res Inst Gastroenterol & Liver Dis, Gastroenterol & Liver Dis Res Ctr, Yeman St,Chamran Expressway, Tehran 1985717413, Iran
关键词
Colorectal cancer; Polyp; ANXA2; LINC00460; MITs; HIF-1; alpha; MESENCHYMAL TRANSITION; CANCER PROGRESSION; EXPRESSION; LNCRNA;
D O I
10.1007/s11033-023-08393-6
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
BackgroundLong intergenic non-coding RNA 460 (LINC00460) as a potential oncogene and Annexin A2 (ANXA2) as a promoter in different cancer progression processes was considered. A significant relationship between the LINC00460 and ANXA2 has been recently discovered in colorectal cancer (CRC). Therefore, defining molecular biomarkers accompanied by lesion histopathologic features can be a suggestive prognostic biomarker in precancerous polyps. This study aimed to investigate the elusive expression pattern of ANXA2 and LINC00460 in polyps.Materials and methodsThe construction of the co-expression and correlation network of LINC00460 and ANXA2 was plotted. LINC00460 and ANXA2 expression in 40 colon polyps was quantified by reverse transcription-real-time polymerase chain reaction. The receiver operating characteristic (ROC) curve was designed for distinguishing the high-risk precancerous lesion from the low-risk. Further, bioinformatics analysis was applied to find the shared MicroRNA-Interaction-Targets (MITs) between ANXA2 and LINC00460, and the associated pathways.ResultsANXA2 has a high co-expression rank with LINC00460 in the lncHUB database. Overexpression of ANXA2 and LINC00460 was distinguished in advanced adenoma polyps compared to the adjacent normal samples. The estimated AUC for ANXA2 and LINC00460 was 0.88 - 0.85 with 93%-90% sensitivity and 81%-70% specificity. In addition, eight MITs were shared between ANXA2 and LINC00460. Enrichment analysis detected several GO terms and pathways, including HIF-1a associated with cancer development.ConclusionIn conclusion, the expression of the ANXA2 and LINC00460 were significantly elevated in pre-cancerous polyps, especially in high-risk adenomas. Collectively, ANXA2 and LINC00460 may be administered as potential prognostic biomarkers in patients with a precancerous large intestine lesion as an alarming issue.
引用
收藏
页码:4505 / 4515
页数:11
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