Reinforcing Protein Biochemistry: A Two-Week Experiment Studying Iron(III) Binding by the Transferrin Protein through Stoichiometric Determination, Stability Analysis, and Visualization of the Binding Site

被引:1
作者
Benjamin-Rivera, Josue A. [1 ]
Otero, Mariela Perez [2 ]
Tinoco, Arthur D. [1 ]
机构
[1] Univ Puerto Rico, Dept Chem, Rio Piedras, PR 00931 USA
[2] Univ Puerto Rico, Dept Biol, Rio Piedras, PR 00931 USA
关键词
Upper-Division Undergraduate; Biochemistry; Laboratory Instruction; Computer-Based Learning; Hands-On Learning; Coordination Compounds; Electrophoresis; Proteins; Quality Analysis; UV-Vis Spectroscopy; Metal Binding Site; Transferrin; ConformationChange; Urea-PAGE; Stoichiometry; PyMOL; HUMAN SERUM TRANSFERRIN; IRON-RELEASE; N-LOBE; CRYSTAL-STRUCTURE; DILYSINE TRIGGER; ANION-BINDING; OVOTRANSFERRIN; LACTOFERRIN; PH; FLUORESCENCE;
D O I
10.1021/acs.jchemed.3c01016
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
The two-week protein biochemistry experience described herein focuses on reinforcing key biochemical concepts and achieving significant learning domain accomplishments for students (Content Knowledge, Logical Mathematical Reasoning, Visualization, Information Literacy, and Knowledge Integration) and valuable teaching opportunities for instructors. The experience encompasses an exploration of the transport protein serum transferrin as an important regulator of Fe(III) biochemistry and incorporates techniques to assess protein-metal stoichiometry and protein stability and to perform molecular visualization. Students gain practical experience in utilizing spectrophotometric analysis for constructing stoichiometric curves, in performing urea-PAGE, and in applying the PyMOL program to evaluate metal coordination at a protein binding site and the associated protein structural change. The learning and teaching accomplishments provide valuable skills that can be extended into research and translated to other teaching formats.
引用
收藏
页码:1656 / 1664
页数:9
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