Crystal growth, morphological, mechanical, spectroscopic studies, optical properties, molecular docking, ADME/T, Hirshfeld surfaces analysis and theoretical calculations of hybrid organic-inorganic phosphate compound

被引:12
作者
Rafik, Abdellatif [1 ]
Tuzun, Burak [2 ]
Zouihri, Hafid [3 ]
EL Ammari, Lahcen [4 ]
Safi, Zaki S. [5 ]
Wazzan, Nuha A. [6 ]
Guedira, Taoufiq [1 ]
机构
[1] Ibn Tofail Univ, Fac Sci, Lab Organ Chem, Catalysis & Environm Lab, Kenitra, Morocco
[2] Sivas Cumhuriyet Univ, Tech Sci Vocat Sch Sivas, Plant & Anim Prod Dept, Sivas, Turkiye
[3] Moulay Ismail Univ Meknes, Fac Sci, Lab Mat Chem & Biotechnol Nat Prod, Meknes, Morocco
[4] Mohammed V Univ Rabat, Fac Sci, Ctr Sci Mat, Lab Chim Appliquee Mat, Ave Ibn Batouta,BP 1014, Rabat, Morocco
[5] Al Azhar Univ Gaza, Fac Sci, Dept Chem, POB 1277, Gaza City, Palestine
[6] King Abdulaziz Univ, Fac Sci, Dept Chem, PO 80203, Jeddah 21589, Saudi Arabia
关键词
Hybrid organic-inorganic; Crystal structure; Hirshfeld surface analysis; DFT calculations; Molecular docking; INTERMOLECULAR INTERACTIONS; TEMPORAL STABILITY; HARTREE-FOCK; NONLINEARITY; PROGRESS; DESIGN; DFT;
D O I
10.1016/j.inoche.2023.111828
中图分类号
O61 [无机化学];
学科分类号
070301 ; 081704 ;
摘要
Molecular organic-inorganic single crystals of 4-carboxyanilinium dihydrogenphosphate [4-CADP] have been grown by the slow evaporation technique. The crystal structure was re-investigated by single-crystal X ray diffraction (SCXRD) analysis without signifiant differences from the previous study. 3D Hirshfeld surface and 2D fingerprint plot studies were performed to understand the intermolecular interactions of the 4-CADP crystal in graphical representation. Functional groups identification was studied with FT-IR spectroscopy. High trans-parency and a wide band gap of 5.44 eV were observed with UV-Vis spectroscopy. Geometrical structure of the 4-CADP compound was performed using the Density Function Theory (DFT) method at the B3LYP/3-21G and PBEPBE/3-21G levels of theory, along with the HF/3-21G basis set. The equilibrium geometry, highest occupied molecular orbitals (HOMO), lowest unoccupied molecular orbitals (LUMO), and molecular electrostatic potential map (MEP) were also calculated and presented. MEP a visual representation of the chemically active sites and comparative reactivity of atoms. Results revealed O-HMIDLINE HORIZONTAL ELLIPSISO and N-HMIDLINE HORIZONTAL ELLIPSISO contacts have the largest impact the Hirshfeld surface. The mechanical properties of the 4-CADP crystal were studied experimentally Vicker's microhardness technique, which revealed that the grown crystal belonged to the softer category. 4-CADP crystal void estimation reveals the mechanical strength and porosity of the material.Last, it was tried to compare the biological activities of the studied hybrid molecule against enzymes: the crystal structure of acetylcholinesterase (AChE) (PDB ID: 4M0E), the crystal structure of butyrylcholinesterase (BChE) (PDB ID: 5NN0), crystal structure of alpha-galactosidase (alpha-Gly) (PDB ID: 1T0O), crystal structure of human carbonic anhydrase I (hCA I) (PDB ID: 2CAB), and the crystal structure of human carbonic anhydrase II (hCA II) (PDB ID: 5AML). Afterwards, ADME/T analysis was performed to predict the effects of molecules on human metabolism.
引用
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页数:21
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