Characteristics of the complete chloroplast genome of Swertia divaricata Harry Sm. (Gentianaceae) and its phylogenetic inference

被引:1
作者
Hou, Yingying [1 ,2 ]
Zhang, Yulong [1 ,2 ]
Yu, Jing [1 ]
Wang, Xinjie [1 ]
机构
[1] Zhengzhou Univ, Dept Integrated Tradit Chinese & Western Med, Affiliated Hosp 1, Zhengzhou, Peoples R China
[2] Zhengzhou Univ, Dept Integrated Tradit Chinese & Western Med, Acad Med Sci, Zhengzhou, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2023年 / 8卷 / 10期
关键词
Swertia divaricata; plastid genome; phylogenetic analysis; SEQUENCE DATA;
D O I
10.1080/23802359.2023.2270211
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Swertia divaricata Harry Sm., 1965, (Gentianaceae) is a perennial herb endemic to Northwest Yunnan, China, belonging to the species-rich genus Swertia. It possesses unique morphological features but its systematic position remains uncertain. To determine its phylogenetic placement, the complete plastid genome of S. divaricata was assembled utilizing high-throughput sequencing data. The genome is circular, spanning 152,073 bp, and comprises a large single-copy (LSC) region of 82,470 bp, a small single-copy (SSC) region of 18,153 bp, and two inverted repeats (IR) regions, each 25,725 bp. A total of 130 genes were annotated, including 85 protein-coding genes, 37 tRNA genes, and eight rRNA genes. The plastome of S. divaricata exhibits a structure and gene composition highly similar to those of other Swertia plastomes. Phylogenetic analysis indicated that S. divaricata is closely related to S. erythrosticta, sister to a subclade comprising species from sections Swertia and Apterae. The plastome sequence described herein constitutes a valuable contribution to phylogenetic and evolutionary research on Swertia.
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收藏
页码:1132 / 1136
页数:5
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