Regulation of plant epigenetic memory in response to cold and heat stress: towards climate resilient agriculture

被引:7
|
作者
Rehman, Shamsur [1 ]
Ahmad, Zishan [2 ,3 ]
Ramakrishnan, Muthusamy [2 ,3 ]
Kalendar, Ruslan [4 ,5 ]
Zhuge, Qiang [1 ]
机构
[1] Nanjing Forestry Univ, Coll Biol & Environm, Coinnovat Ctr Sustainable Forestry Southern China, Key Lab Forest Genet & Biotechnol,Minist Educ, Nanjing, Peoples R China
[2] Nanjing Forestry Univ, Coinnovat Ctr Sustainable Forestry Southern China, Nanjing 210037, Peoples R China
[3] Nanjing Forestry Univ, Bamboo Res Inst, Nanjing 210037, Peoples R China
[4] Univ Helsinki, Helsinki Inst Life Sci HiLIFE, Bioctr 3, Viikinkaari 1, FI-00014 Helsinki, Finland
[5] Nazarbayev Univ, Ctr Life Sci, Natl Lab Astana, Astana, Kazakhstan
基金
中国国家自然科学基金;
关键词
Epigenetic regulation; Stress memory; Machine learning; Climate resilient agriculture; Transgenerational memory; FLOWERING-LOCUS-C; SHOCK TRANSCRIPTION FACTOR; DNA METHYLATION; ABIOTIC-STRESS; ACQUIRED THERMOTOLERANCE; FREEZING TOLERANCE; GENE-EXPRESSION; SOMACLONAL VARIATION; HISTONE METHYLATION; SIRNA BIOGENESIS;
D O I
10.1007/s10142-023-01219-5
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Plants have evolved to adapt and grow in hot and cold climatic conditions. Some also adapt to daily and seasonal temperature changes. Epigenetic modifications play an important role in regulating plant tolerance under such conditions. DNA methylation and post-translational modifications of histone proteins influence gene expression during plant developmental stages and under stress conditions, including cold and heat stress. While short-term modifications are common, some modifications may persist and result in stress memory that can be inherited by subsequent generations. Understanding the mechanisms of epigenomes responding to stress and the factors that trigger stress memory is crucial for developing climate-resilient agriculture, but such an integrated view is currently limited. This review focuses on the plant epigenetic stress memory during cold and heat stress. It also discusses the potential of machine learning to modify stress memory through epigenetics to develop climate-resilient crops.
引用
收藏
页数:24
相关论文
共 50 条
  • [1] Regulation of plant epigenetic memory in response to cold and heat stress: towards climate resilient agriculture
    Shamsur Rehman
    Zishan Ahmad
    Muthusamy Ramakrishnan
    Ruslan Kalendar
    Qiang Zhuge
    Functional & Integrative Genomics, 2023, 23
  • [2] Epigenetic Regulation of Heat Stress in Plant Male Reproduction
    Malik, Shikha
    Zhao, Dazhong
    FRONTIERS IN PLANT SCIENCE, 2022, 13
  • [3] Epigenetic regulation of heat and cold stress responses in crop plants
    Verma, Neha
    Giri, Shiv Kumar
    Singh, Gulab
    Gill, Ritu
    Kumar, Anil
    PLANT GENE, 2022, 29
  • [4] RNA Regulation in Plant Cold Stress Response
    Nakaminami, Kentaro
    Seki, Motoaki
    SURVIVAL STRATEGIES IN EXTREME COLD AND DESICCATION: ADAPTATION MECHANISMS AND THEIR APPLICATIONS, 2018, 1081 : 23 - 44
  • [5] Epigenetic stress memory: A new approach to study cold and heat stress responses in plants
    Ramakrishnan, Muthusamy
    Zhang, Zhijun
    Mullasseri, Sileesh
    Kalendar, Ruslan
    Ahmad, Zishan
    Sharma, Anket
    Liu, Guohua
    Zhou, Mingbing
    Wei, Qiang
    FRONTIERS IN PLANT SCIENCE, 2022, 13
  • [6] Mechanisms of Plant Epigenetic Regulation in Response to Plant Stress: Recent Discoveries and Implications
    Abdulraheem, Mukhtar Iderawumi
    Xiong, Yani
    Moshood, Abiodun Yusuff
    Cadenas-Pliego, Gregorio
    Zhang, Hao
    Hu, Jiandong
    PLANTS-BASEL, 2024, 13 (02):
  • [7] Chromatin-Based Epigenetic Regulation of Plant Abiotic Stress Response
    Pandey, Garima
    Sharma, Namisha
    Sahu, Pranav Pankaj
    Prasad, Manoj
    CURRENT GENOMICS, 2016, 17 (06) : 490 - 498
  • [8] The epigenetic chromatin-based regulation of somatic heat stress memory in plants
    Haider, Saqlain
    Iqbal, Javed
    Shaukat, Muzaffar
    Naseer, Sana
    Mahmood, Tariq
    PLANT GENE, 2021, 27
  • [9] Epigenetic regulation and epigenetic memory resetting during plant rejuvenation
    Liu, Jie
    Ke, Meng
    Sun, Yuhan
    Niu, Shihui
    Zhang, Wenli
    Li, Yun
    JOURNAL OF EXPERIMENTAL BOTANY, 2024, 75 (03) : 733 - 745
  • [10] Epigenetic Regulation During Plant Development and the Capacity for Epigenetic Memory
    Hemenway, Elizabeth A.
    Gehring, Mary
    ANNUAL REVIEW OF PLANT BIOLOGY, 2023, 74 : 87 - 109