De novo genome sequence of endophytic biocontrol strain Bacillus sp. ST24 isolated from rice seed

被引：1
作者：
Khanal, Sabin [1 ]
Antony-Babu, Sanjay [2 ]
Zhou, Xin-Gen [1 ]
机构：
[1] Texas A&M AgriLife Res Ctr, Beaumont, TX 77713 USA
[2] Texas A&M Univ, Dept Plant Pathol & Microbiol, College Stn, TX 77843 USA
来源：
MICROBIOLOGY RESOURCE ANNOUNCEMENTS | 2023年
关键词：
Bacillus; genomics; Bacillus cereus; Bacillus thuringiensis; phytobacteriology; CUCUMBER; CLUSTER;
D O I：
10.1128/MRA.00352-23
中图分类号：
Q93 [微生物学];
学科分类号：
071005 ; 100705 ;
摘要：
In this study, we present the genome sequence of Bacillus sp. strain ST24, an endophytic bacterium isolated from rice seeds. The genome assembly comprises a total of 5,799,877 bp, with a GC content of 34.81%. Furthermore, our analysis revealed the presence of various genes associated with antibiotic production, as well as genes involved in polyketide biosynthesis and non-ribosomal polyketide-like clusters.
引用
收藏
页数：3
相关论文
共 22 条
  • [1] Petrobactin, a photoreactive siderophore produced by the oil-degrading marine bacterium Marinobacter hydrocarbonoclasticus
    Barbeau, K
    Zhang, GP
    Live, DH
    Butler, A
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2002, 124 (03) : 378 - 379
  • [2] antiSMASH 6.0: improving cluster detection and comparison capabilities
    Blin, Kai
    Shaw, Simon
    Kloosterman, Alexander M.
    Charlop-Powers, Zach
    van Wezel, Gilles P.
    Medema, Marnix H.
    Weber, Tilmann
    [J]. NUCLEIC ACIDS RESEARCH, 2021, 49 (W1) : W29 - W35
  • [3] Promising bacterial genera for agricultural practices: An insight on plant growth-promoting properties and microbial safety aspects
    Ferreira, Carlos M. H.
    Soares, Helena M. V. M.
    Soares, Eduardo V.
    [J]. SCIENCE OF THE TOTAL ENVIRONMENT, 2019, 682 : 779 - 799
  • [4] Biological control of plant pathogens by Bacillus species
    Fira, Djordje
    Dimkic, Ivica
    Beric, Tanja
    Lozo, Jelena
    Stankovic, Slavisa
    [J]. JOURNAL OF BIOTECHNOLOGY, 2018, 285 : 44 - 55
  • [5] Identification and distribution of fungal pathogens associated with seedling blight of rice in the southern United States
    Gaire, Shankar P.
    Zhou, Xin-Gen
    Zhou, Yong
    Shi, Jun
    Jo, Young-Ki
    [J]. PLANT PATHOLOGY, 2023, 72 (01) : 76 - 88
  • [6] QUAST: quality assessment tool for genome assemblies
    Gurevich, Alexey
    Saveliev, Vladislav
    Vyahhi, Nikolay
    Tesler, Glenn
    [J]. BIOINFORMATICS, 2013, 29 (08) : 1072 - 1075
  • [7] Biocontrol of Rhizoctonia solani damping-off disease in cucumber with Bacillus pumilus SQR-N43
    Huang, Xinqi
    Zhang, Nan
    Yong, Xiaoyu
    Yang, Xingming
    Shen, Qirong
    [J]. MICROBIOLOGICAL RESEARCH, 2012, 167 (03) : 135 - 143
  • [8] Sustainable Surfactin Production by Bacillus subtilis Using Crude Glycerol from Different Wastes
    Janek, Tomasz
    Gudina, Eduardo J.
    Polomska, Xymena
    Biniarz, Piotr
    Jama, Dominika
    Rodrigues, Ligia R.
    Rymowicz, Waldemar
    Lazar, Zbigniew
    [J]. MOLECULES, 2021, 26 (12):
  • [9] Characterization of the Complete Zwittermicin A Biosynthesis Gene Cluster from Bacillus cereus
    Kevany, Brian M.
    Rasko, David A.
    Thomas, Michael G.
    [J]. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2009, 75 (04) : 1144 - 1155
  • [10] Introducing EzTaxon-e: a prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species
    Kim, Ok-Sun
    Cho, Yong-Joon
    Lee, Kihyun
    Yoon, Seok-Hwan
    Kim, Mincheol
    Na, Hyunsoo
    Park, Sang-Cheol
    Jeon, Yoon Seong
    Lee, Jae-Hak
    Yi, Hana
    Won, Sungho
    Chun, Jongsik
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2012, 62 : 716 - 721
123