Uncertainty quantification in DenseNet model using myocardial infarction ECG signals

被引:32
作者
Jahmunah, V. [1 ]
Ng, E. Y. K. [1 ]
Tan, Ru-San [2 ]
Oh, Shu Lih [3 ]
Acharya, U. Rajendra [3 ,4 ,5 ,6 ,7 ,8 ]
机构
[1] Nanyang Technol Univ, Sch Mech & Aerosp Engn, Singapore, Singapore
[2] Natl Heart Ctr, Singapore, Singapore
[3] Ngee Ann Polytech, Sch Engn, Singapore, Singapore
[4] Singapore Univ Social Sci, Sch Social Sci & Technol, Biomed Engn, Singapore, Singapore
[5] Kumamoto Univ, Int Res Org Adv Sci & Technol IROAST, Kumamotov, Japan
[6] Asia Univ, Dept Bioinformat & Med Engn, Taichung, Taiwan
[7] Univ Southern Queensland, Sch Management & Enterprise, Darling Ht, QLD, Australia
[8] Nanyang Technol Univ, Sch Mech & Aerosp Engn, Singapore 639798, Singapore
关键词
Uncertainty quantification; Myocardial infarction; DenseNet model; Deep learning; Predictive entropy; Reverse KL divergence; MORTALITY; FUSION;
D O I
10.1016/j.cmpb.2022.107308
中图分类号
TP39 [计算机的应用];
学科分类号
081203 ; 0835 ;
摘要
Background and objective: Myocardial infarction (MI) is a life-threatening condition diagnosed acutely on the electrocardiogram (ECG). Several errors, such as noise, can impair the prediction of automated ECG diagnosis. Therefore, quantification and communication of model uncertainty are essential for reliable MI diagnosis.Methods: A Dirichlet DenseNet model that could analyze out-of-distribution data and detect misclassi-fication of MI and normal ECG signals was developed. The DenseNet model was first trained with the pre-processed MI ECG signals (from the best lead V6) acquired from the Physikalisch-Technische Bun-desanstalt (PTB) database, using the reverse Kullback-Leibler (KL) divergence loss. The model was then tested with newly synthesized ECG signals with added em and ma noise samples. Predictive entropy was used as an uncertainty measure to determine the misclassification of normal and MI signals. Model per-formance was evaluated using four uncertainty metrics: uncertainty sensitivity (UNSE), uncertainty speci-ficity (UNSP), uncertainty accuracy (UNAC), and uncertainty precision (UNPR); the classification threshold was set at 0.3.Results: The UNSE of the DenseNet model was low but increased over the studied decremental noise range (-6 to 24 dB), indicating that the model grew more confident in classifying the signals as they got less noisy. The model became more certain in its predictions from SNR values of 12 dB and 18 dB onwards, yielding UNAC values of 80% and 82.4% for em and ma noise signals, respectively. UNSP and UNPR values were close to 100% for em and ma noise signals, indicating that the model was self-aware of what it knew and didn't. Conclusion: Through this work, it has been established that the model is reliable as it was able to convey when it was not confident in the diagnostic information it was presenting. Thus, the model is trustworthy and can be used in healthcare applications, such as the emergency diagnosis of MI on ECGs.(c) 2022 Elsevier B.V. All rights reserved.
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收藏
页数:14
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