Pan-cancer and single-cell analysis of actin cytoskeleton genes related to disulfidptosis

被引:3
作者
Shen, Li-ping [1 ]
Jiang, Han-tao [2 ]
机构
[1] Wenzhou Med Univ, Dept Clin Microbiol Lab, Dept Clin Lab, Taizhou 318000, Zhejiang, Peoples R China
[2] Wenzhou Med Univ, Taizhou Hosp Zhejiang Prov, Dept Orthoped, Taizhou 318000, Zhejiang, Peoples R China
关键词
disulfidptosis; actin cytoskeleton; pan-cancer; single cell; PROSTATE-CANCER; INHIBITS PROLIFERATION; MESENCHYMAL TRANSITION; BINDING PROTEIN; IQGAP1; FILAMIN; INVASION; METASTASIS; ACTIVATION; NUCLEAR;
D O I
10.1515/med-2024-0929
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Disulfidptosis was recently reported to be caused by abnormal disulfide accumulation in cells with high SLC7A11 levels subjected to glucose starvation, suggesting that targeting disulfidptosis was a potential strategy for cancer treatment. We analyzed the relationships between gene expression and mutations and prognoses of patients. In addition, the correlation between gene expression and immune cell infiltration was explored. The potential regulatory mechanisms of these genes were assessed by investigating their related signaling pathways involved in cancer, their expression patterns, and their cellular localization. Most cancer types showed a negative correlation between the gene-set variation analysis (GSVA) scores and infiltration of B cells and neutrophils, and a positive correlation between GSVA scores and infiltration of natural killer T and induced regulatory T cells. Single-cell analysis revealed that ACTB, DSTN, and MYL6 were highly expressed in different bladder urothelial carcinoma subtypes, but MYH10 showed a low expression. Immunofluorescence staining showed that actin cytoskeleton proteins were mainly localized in the actin filaments and plasma membrane. Notably, IQGAP1 was localized in the cell junctions. In conclusion, this study provided an overview of disulfidptosis-related actin cytoskeleton genes in pan-cancer. These genes were associated with the survival of patients and might be involved in cancer-related pathways.
引用
收藏
页数:21
相关论文
共 65 条
[1]   A pan-cancer proteomic perspective on The Cancer Genome Atlas [J].
Akbani, Rehan ;
Ng, Patrick Kwok Shing ;
Werner, Henrica M. J. ;
Shahmoradgoli, Maria ;
Zhang, Fan ;
Ju, Zhenlin ;
Liu, Wenbin ;
Yang, Ji-Yeon ;
Yoshihara, Kosuke ;
Li, Jun ;
Ling, Shiyun ;
Seviour, Elena G. ;
Ram, Prahlad T. ;
Minna, John D. ;
Diao, Lixia ;
Tong, Pan ;
Heymach, John V. ;
Hill, Steven M. ;
Dondelinger, Frank ;
Stadler, Nicolas ;
Byers, Lauren A. ;
Meric-Bernstam, Funda ;
Weinstein, John N. ;
Broom, Bradley M. ;
Verhaak, Roeland G. W. ;
Liang, Han ;
Mukherjee, Sach ;
Lu, Yiling ;
Mills, Gordon B. .
NATURE COMMUNICATIONS, 2014, 5
[2]   Nuclear versus Cytoplasmic Localization of Filamin A in Prostate Cancer: Immunohistochemical Correlation with Metastases [J].
Bedolla, Roble G. ;
Wang, Yu ;
Asuncion, Alfredo ;
Chamie, Karim ;
Siddiqui, Salma ;
Mudryj, Maria M. ;
Prihoda, Thomas J. ;
Siddiqui, Javed ;
Chinnaiyan, Arul M. ;
Mehra, Rohit ;
White, Ralph W. de Vere ;
Ghosh, Paramita M. .
CLINICAL CANCER RESEARCH, 2009, 15 (03) :788-796
[3]   The Role of the Cytoskeleton in Regulating the Natural Killer Cell Immune Response in Health and Disease: From Signaling Dynamics to Function [J].
Ben-Shmuel, Aviad ;
Sabag, Batel ;
Biber, Guy ;
Barda-Saad, Mira .
FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY, 2021, 9
[4]   IQGAP proteins are integral components of cytoskeletal regulation [J].
Briggs, MW ;
Sacks, DB .
EMBO REPORTS, 2003, 4 (06) :571-574
[5]   Filamin (280-kDa actin-binding protein) is a caspase substrate and is also cleaved directly by the cytotoxic T lymphocyte protease granzyme B during apoptosis [J].
Browne, KA ;
Johnstone, RW ;
Jans, DA ;
Trapani, JA .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2000, 275 (50) :39262-39266
[6]   Regulation of extracellular matrix degradation and metastatic spread by IQGAP1 through endothelin-1 receptor signalling in ovarian cancer [J].
Chellini, Lidia ;
Caprara, Valentina ;
Spadaro, Francesca ;
Sestito, Rosanna ;
Bagnato, Anna ;
Rosano, Laura .
MATRIX BIOLOGY, 2019, 81 :17-33
[7]   Elevated IQGAP1 and CDC42 levels correlate with tumor malignancy of human glioma [J].
Cui, Xiaobo ;
Song, Laixiao ;
Bai, Yunfei ;
Wang, Yaping ;
Wang, Boqian ;
Wang, Wei .
ONCOLOGY REPORTS, 2017, 37 (02) :768-776
[8]   RETRACTED: IQGAP1-siRNA inhibits proliferation and metastasis of U251 and U373 glioma cell lines (Retracted Article) [J].
Diao, Bo ;
Liu, Ying ;
Zhang, Yi ;
Yu, Jing ;
Xie, Jun ;
Xu, Guo-Zheng .
MOLECULAR MEDICINE REPORTS, 2017, 15 (04) :2074-2082
[9]   Reactivation of epigenetically silenced miR-124 reverses the epithelial-to-mesenchymal transition and inhibits invasion in endometrial cancer cells via the direct repression of IQGAP1 expression [J].
Dong, Peixin ;
Ihira, Kei ;
Xiong, Ying ;
Watari, Hidemichi ;
Hanley, Sharon J. B. ;
Yamada, Takahiro ;
Hosaka, Masayoshi ;
Kudo, Masataka ;
Yue, Junming ;
Sakuragi, Noriaki .
ONCOTARGET, 2016, 7 (15) :20260-20270
[10]   Tuning immunity through tissue mechanotransduction [J].
Du, Huixun ;
Bartleson, Juliet M. ;
Butenko, Sergei ;
Alonso, Valentina ;
Liu, Wendy F. ;
Winer, Daniel A. ;
Butte, Manish J. .
NATURE REVIEWS IMMUNOLOGY, 2023, 23 (03) :174-188